| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1993 |
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| Symbol | hemN |
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| ID | 1183638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2177061 |
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| End bp | 2178443 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393371 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | NP_791816 |
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| Protein GI | 28869197 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0376675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGACG CCATTCGTTG GGATTCAGAC CTGATCCATC GCTACGATGT GGCAGGACCG
CGCTACACGT CTTATCCGAC CGCCGTGCAA TTTGATACCC GGGCAGGCGC ATTCGAGCTG
CTGCACGCCC TGCGGGAAAG TCGCAAGGCG CGGCGTCCGT TGTCGCTTTA CGTGCACATC
CCATTCTGCG CAAATATTTG CTACTACTGT GCGTGCAACA AAGTGATCAC CAAGGATCGC
GGCCGGGCAC AGGCTTACCT GCAGCGGCTT GAACACGAAA TCCGGATGCT TGCCTGCCAT
CTGGCGCCCA GCCAGGTGGT CGAGCAACTG CACCTGGGCG GCGGCACACC GACCTTCCTC
AGCCATGATG AACTGCGTCG CCTGATGGCC CGGTTGCGCG CGCATTTCAC GCTGCTGGAG
GATGATTCCG GCGACTATGG CATCGAGATC GACCCGCGCG AAGCGGATTG GGCAAGCATG
GGTCTGCTGC GCGAACTGGG TTTCAACCGG GTCAGCCTTG GCGTGCAGGA CCTTGACCCG
ACAGTGCAAC GGGCGATCAA CCGCATGCAG AGCCTGGAAG AAACCCGCGC CATCGTCGAG
GCCGCACGCA CGTTGCAATT TCGCTCGGTG AACATCGACC TGATCTACGG CCTGCCCAGA
CAAACCCCGC AAGGGTTCAG CCGCACGGTG GACGAAATCA TCGAGTTGCA GCCTGATCGG
CTGTCAGTGT TCAACTACGC CCATCTGCCG GAACGCTTCA TGCCGCAGCG GCGCATCGAC
GCGTCGGACC TGCCGGATGC GCACACCAAG CTACTCATGC TGGAGCGTAC CGTCGAGCAA
CTGACCGACG CAGGTTACCG GTACATCGGA ATGGACCACT TCGCCCTGCC CGATGACGAG
TTGGCCATCG CTCAGGAAGA ACTGACCCTG CACCGCAACT TTCAGGGCTA CACCACGCAT
GGCCACTGCG ACCTGATCGG GCTGGGGGTT TCGGCCATCA GCCAGGTCGG CGACCTGTAC
AGCCAGAACA GCAGCGACCT GAACGACTAT CAGCGGCTGC TGGACAGTGA TCAACCCGCA
ACACTGCGCG GGCTGATCTG CAGCGAGGAC GACCGGATCA GACGCGCCGT CATCCAGCAG
TTGATCTGCC ACTTCACCCT GAATTTCAGT GAACTGGAAA AAGCGTTCGC CATAAGTTTC
CGGGACTACT TCGCCGATGC GTGGCCGCAG TTGCTGTGCA TGGCAGACGA CGGGCTGATT
ACGCTGAGCG ATAGTGCAAT TGAAGTCAGG CCAGCGGGCC GGTTGCTGGT GCGCTCGGTG
TGCATGGTAT TTGACGCGTA CCTGACCCGG CAGAACAGGC AGCAGTTCTC CCGGGCGATA
TAA
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| Protein sequence | MLDAIRWDSD LIHRYDVAGP RYTSYPTAVQ FDTRAGAFEL LHALRESRKA RRPLSLYVHI
PFCANICYYC ACNKVITKDR GRAQAYLQRL EHEIRMLACH LAPSQVVEQL HLGGGTPTFL
SHDELRRLMA RLRAHFTLLE DDSGDYGIEI DPREADWASM GLLRELGFNR VSLGVQDLDP
TVQRAINRMQ SLEETRAIVE AARTLQFRSV NIDLIYGLPR QTPQGFSRTV DEIIELQPDR
LSVFNYAHLP ERFMPQRRID ASDLPDAHTK LLMLERTVEQ LTDAGYRYIG MDHFALPDDE
LAIAQEELTL HRNFQGYTTH GHCDLIGLGV SAISQVGDLY SQNSSDLNDY QRLLDSDQPA
TLRGLICSED DRIRRAVIQQ LICHFTLNFS ELEKAFAISF RDYFADAWPQ LLCMADDGLI
TLSDSAIEVR PAGRLLVRSV CMVFDAYLTR QNRQQFSRAI
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