Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1992 |
Symbol | |
ID | 1183637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2176562 |
End bp | 2177041 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393370 |
Product | hypothetical protein |
Protein accession | NP_791815 |
Protein GI | 28869196 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.331155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTTG TCATGTCCAT GACGCTCCCG CTGATCAACA GCATCACGAT CCGTACGGCG ACATCGCAAG TCACCTACAG CCAGACAGCA GACAGCAACG TCGAAGCGTC TGCCAGCAGC GCCAAAAGTG TGGAGGTCAA TCTGTCTTCG GAAGGCAAGG CGGCCGCATC GTCATCCTCA AGAGATGCGG ATATCGAGCA GAGTGGCCTG CCTGCCTCTG TGCAGAAGAT TCTCAAGGGG ATTCGCGAGC TGCAACGCAA GATCGAGGAA ACCATGGATC AGTTGCAAAA GGTTCTCAAC GACCAGAGTC TGGACCCTGA AGAGCGCCGG ACCAAGGCTG CTGCGCTGCA GACCGTGCTC AGCACGTTGC AGGCGCAGAT GAGCAACGCT ACAGCGGATC TCTCGTCGCT CATGAACAGC CTGAAATCCA GCGACTCCGA CAAGATCAAC GCCGGCATGC TGGTTCTGGC GAAGATGTAA
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Protein sequence | MHLVMSMTLP LINSITIRTA TSQVTYSQTA DSNVEASASS AKSVEVNLSS EGKAAASSSS RDADIEQSGL PASVQKILKG IRELQRKIEE TMDQLQKVLN DQSLDPEERR TKAAALQTVL STLQAQMSNA TADLSSLMNS LKSSDSDKIN AGMLVLAKM
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