Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1977 |
Symbol | flhF |
ID | 1183622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2162626 |
End bp | 2163954 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393355 |
Product | flagellar biosynthesis protein FlhF |
Protein accession | NP_791800 |
Protein GI | 28869181 |
COG category | [N] Cell motility |
COG ID | [COG1419] Flagellar GTP-binding protein |
TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.218828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTA AGCGATTTTT CGCCGCCGAT ATGCGTCAAG CCATGAAACT GGTTCGCGAT GAGCTGGGCG CCGAGGCGGC CATCATCGGT AACCGGCGCA TTGCCGGTGG CGTAGAGCTG ACTGCCGCTC TGGATTACAA GCTGTCTGCC CTGGCGCCGC GTGTGCCGAA TATGGAACTC GAAGACGAGC TGCGCAAGAC TCAGTCGCGC ATCGTCTCCG CTCAGGCCGA ACTGAACAAC CGTAGCGACA GCGATGCGTC GATCAACCTT CAGCTGTTTT CCGGCAAGCC GGTCAGTGCT GCCGACACGC ATATCGAACC GACGCTCGAA GAGCCGCCAC GCCCGTTTGC CTACGCTCCC GCACCGGCTG CAGAGCCTGC TGGCGGTCAG CGTGCCTTTG ACTCGATGCG CTCTGAATTG AACGGCCTGC GCGAGCTGCT GGAAGTCCAG CTCGGCTCCC TTGCCTGGAA CCAGCTACAA GGCAGCCGTC CGCAGCAGGC CAACCTGTGG CGCCGTCTGC AACGCGTCGG CCTGTCCGGC CCGCTGTCTC GCGATCTGCT GTCGATGATC CCGGACATCG ACGAGCCTCG TCAGGCCTGG CGCATGTTGC TGGCCCATCT GGCCCGCATG ATTGCTGTAC CGGACATCGA GCCGCTGGAA GAGGGCGGAG TGATTGCCAT GGTCGGTCCT GCCGGTATGG GCAAGACCAC CACTCTGGCC AAACTGGCGG CACGTTATGT GTTGAAGTAC GGCCCGCAGA ATATCGCCCT GGTCAGTATG GACAGTTTCC GCATCGGCGC GCAGGAACAG CTCAAGACTC TTGGGCGCAT CCTCAACGTG CCGGTCACCC ATGTCGATCC GGGCCAGTCG CTGGTTCAGG CGCTGGAGCC TTTGCTGCGC AAGCGCGTGG TGCTGATCGA TACCGCCGGG CTGCAGGCCA GTGATCCTGC GCTGCGCATG CAGCTTGAAA GCCTGGCAGG GCGCGGCATC AAATCACGTA ACTACCTGGT GCTGGCGACG ACCAGCCAGA AGCAGGTGCT GACCGCTGCG TATCACAGTT ACAAACGGTG TGGCCTGGCC GGATGCATTC TGACCAAGCT TGATGAAACA GCCAGCCTGG GCGAAGTCCT GAGCCTGGCG ATCAGTCACG AGTTACCGGT GGCCTACCTC ACGGACGGTC CACGTATTCC TGATGACCTG CACACTCCAC GACGTCATCA ACTGGTGAGT CGTGCGGTGA GTGTGCAGAT GCAGGATGAG CCTAGCGAGG AAGCGATGGC GGATATGTTT GCTGACCTCT ATCACACCCC TGGCAAGAGA GTGGGTTAA
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Protein sequence | MQVKRFFAAD MRQAMKLVRD ELGAEAAIIG NRRIAGGVEL TAALDYKLSA LAPRVPNMEL EDELRKTQSR IVSAQAELNN RSDSDASINL QLFSGKPVSA ADTHIEPTLE EPPRPFAYAP APAAEPAGGQ RAFDSMRSEL NGLRELLEVQ LGSLAWNQLQ GSRPQQANLW RRLQRVGLSG PLSRDLLSMI PDIDEPRQAW RMLLAHLARM IAVPDIEPLE EGGVIAMVGP AGMGKTTTLA KLAARYVLKY GPQNIALVSM DSFRIGAQEQ LKTLGRILNV PVTHVDPGQS LVQALEPLLR KRVVLIDTAG LQASDPALRM QLESLAGRGI KSRNYLVLAT TSQKQVLTAA YHSYKRCGLA GCILTKLDET ASLGEVLSLA ISHELPVAYL TDGPRIPDDL HTPRRHQLVS RAVSVQMQDE PSEEAMADMF ADLYHTPGKR VG
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