Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1973 |
Symbol | fliQ |
ID | 1183618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2157899 |
End bp | 2158168 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393351 |
Product | flagellar biosynthetic protein FliQ |
Protein accession | NP_791796 |
Protein GI | 28869177 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00808662 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGG AAGTTGCCGT CGATCTGTTT CGCGAAGCGC TGTGGCTGAC CACGGTGCTG GTGGCGATCC TCGTAGTTCC GAGCCTGTTG TGCGGCCTGC TGGTGGCGAT GTTTCAGGCG GCCACGCAGA TCAACGAACA GACTCTGAGC TTCCTGCCGC GTCTGCTGGT GATGCTGGTG ACGCTCATCG TCATCGGCCC CTGGCTGCTG AAAATATTCA TGGAATACAT GCTGTCGCTG TACACCAGTA TTCCGACGCT GATCGGCTAG
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Protein sequence | MTPEVAVDLF REALWLTTVL VAILVVPSLL CGLLVAMFQA ATQINEQTLS FLPRLLVMLV TLIVIGPWLL KIFMEYMLSL YTSIPTLIG
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