| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1918 |
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| Symbol | |
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| ID | 1183563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2097934 |
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| End bp | 2101455 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393296 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | NP_791741 |
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| Protein GI | 28869122 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTT CACGCCTGGT CAGTATTGTC ATCCCCGCTT ACAAACCGGC TTTCTTTGAA
GCTGCACTTG CCAGTGCGCT GCGACAGAAC CATGACGACA TCGAGATCAT CATCACCGAT
GACTGCCGCA ACGACGGCAT CAAGGACATT GTCGAAAAGC TCAGGCCGAC CAGCCCTTGG
CCGATTCTTT ATGCAAAGAA CCAAACGCCG CTGGGCGAGC CGCACAACAT CGCGCAGGGC
ATACGCCTGG CAAGCGGTGA GTACATCAAG TTTCTCTACG ACGACGACAT CCTGCTTCCC
GACTGCGTGC GATTGATGTT CGATGTCCTG CACGACAGCC CCGATATCAA AGTGGTGTCC
GCGACCCGAA AGAGAATCGA TGCCGCTGGC GCGCTGCTGG CCGACAATCT CTACACCGTC
TACCCGTTCG GCAAGAACGT TGTTCTCAAC GGTCCCGAGC TGGTGTCGTT TCTGGCCCAG
TACCCTATCA ATTTCGTCGG CGAGCCGAGT GCCGTCATGT GTCGTCGTGA AGACCTGCTG
GTATTTGGTC AGGACATCAT GTCGCTGGAG CAGGTGGTGA TCTGGGGGCT GGGTGATCTG
GCCATTTATG CAAAGCTCTT GCGCCAGGGC AATCTGGCGA TGCTGGCCCG CCCGCTGTCC
TATTTCCGCG TGTCCGATCA GCAGAGCAGT GAGGCATTCC GAAAAGACCC GACCCTGCCC
CGCGAGGGCC ACGCCAATTT CACTCGCATT CCCGCAGCGC TGGGCTGGGT AAGGCCCGAG
GAGCTTAACG GCAAGGTCAA GATTGCGCCC TTGTCACAAC GTGACAACGT CCAGGAAATG
GACTTGCTGG CCTACTTCGA CAGAAGGTCC GACGCCACGG TGCGCAACAC CCGTATCGCT
GGCTGGCTGG GTCAGCGCAG ACCGACGCCA GCCCAGCACG CCCTGCTCAA CGAATACCTG
CAGCAGCACA ACGGTGGCCC GACGATCGCG ATTGTTGTAT CGGACTTCAA TCAGCAACCC
GAAAGCGTAC TCAGCACGCT GCAAAGCCTC GCCTCGGATG CGCCGCTGCT CGACAAGCTG
AAGGTGTTTG TCCTTGCCGA CTACGACAGG GACCAGCAGA CACCTCTGCA AGCGCAACTG
CCCTGGCGGG ATGCCAGCCT GGACAACCGC GCAACCGTCA TCAACGAGCT GATGCAGGAT
AACGACCACG ACTGGTGGAT TCTGATCGAC GCCGGCACAA CCTTCACGCC GAGCGGCCTG
TTGTGTGCGG CCATGACCCT GATCGACGCG CCACAGGCCT GTGCGGTGTT CGGCGACGAA
GTGACCCTGC ATGCGCAGGC CGGGGCCCAC CTGGCCTTTC GCCCGGATTT CAGTCTCGAC
TACCTGCTGG CCTGCCCCGC TGCGACCAGC CGCAACTGGC TGTTCAACCG CGAAAAAGCC
CTGGCGGTGG GCGGCTTCGA CTCAAGCCAC GCGCACGCCA TCGAACTCGA CCTGATCCTG
CGCATGATCG AGGACGCGGG CTTTACCGAG TTTGTGCATT CGCCAGAGCC AATGATCATC
TCGCCGTTGT GGCAAGCGCA GGACAACTAC GATCAGGCGC GCACGATCCA ACGGCACCTG
CACGCGCGCG GCTATGCGGG TGGTCAGGTG CACGCCCTTG AGTCGGGGCA TTACCGGATC
GAGTACGGCC ATGCCGATCA GCCGCTGGTC TCGATCCTGG TCACCTCTCA GGATCAGTTG
CAGACGCTGC TGCCCTGCGT CGAAAGCATC CTGGAAAACA CGACGTATCC GTTCTATGAA
ATTCTGATCT GCGACAACAA CAGCCAGTCG GCCGAAACCA CAGAATGGCT GGCGACCATC
GACTCGATGC AGTCGGAACG CATCCGTGTG CTTCGTCATG AACAGACAGT CAGCCCGTCG
GCGCTGCTCA ATGCTGCAGC CAGCCACGCA CTGGGCGACT ACCTGCTGAC GCTGGACAGC
CATGGGTTGA TCATTCAGAA GGACTGGCTC GACCATTTGC TCAACCACGC ACTGCGCCCT
GAAGTAGGCG TTGTGGGGGC AAAAATCATT TCAACGGATG GCAATGTCGT CGGGGCGGGT
ATCATCCTGG GGCTCAATGG CACCGCCGGG GCAGTCACCG CCAGCGCGAT CGCAGCGTCT
GTCAGCTATG CGCAACGCCT CGAAACAGAC CAGAACTACA GTGCTGTGAG CGGATCCTGC
CTGATGATCC GCAAATCAGT GTATGACCAG GTGCAAGGCC TGGACGAGCA CCTGTTCCCT
GCCCGGTTCA ATGATGTGGA CCTCTGCCTG AAGGCGCGCA GCGCCGGGCA TCTGGTGGTC
TGGACGCCAC ATGCCATCGT TGCGTTGCGC CCCAATGAGG TCCAACACGA CGCCGAGGCA
ATGGATTTCG CGGCACGCGC CCTCTCCCAC CGCTGGCTGC ATTACATGGC CTGGGACCCG
GCCTACAACA AGAACCTGGC GCTGACCGAC AGCTTCGTCA CCCAGAGCAA CCAGGCGTTG
AGCTGGCGGC CTTTGGTTCA TCGCCCGTTG CCTGTGGTCC TCGCTCAGCC CTGCAATCAC
AGCGCTGCCG GCAATCGCAT CGCGGCCACA CTGCAAAGCC TGTGCAGCAA GCGCGAAGCA
GACGGCGTCG TCAGCTATAC GGCGCTGCCG CTCGTGGAGG TCGCCAGGCT CAGCCCGGAC
TCGGTGGTCA TTCAGGGGCC GATAGACGAA AACCTGATCG CCAGCATCAG CGCCATCAAA
GACCACACCA ATGCCTGGGT GACCTACGAC CTGCCAGAGT TTCCGTCTTA CGCTGAAGTC
GACAAGAGCG CAGCCCCACT CGCCACAGTC CAGGCATCAC TGCGCCACGG GCTGGCACGG
GCAGACCTGA TAACCGTTCC GACCAGCGCC TTGGCGCAAC TGCTCGAAGA CTCACACCCC
AATGTTCAGG TCATCGAAAC GCGACTTGCA CCTGCTCCCT GGTCAACGCT GCACAGCGAG
CATCGGACTC GCTCCAAACC TCGCGTAGGC TGGGTCGGCA CAGCGAGTGA ACTGGGCAAC
CTGCTGATAC TGTCAGAAGT CATCAAGGCG CTGGCAGACC GCGTGGAATG GGTCATCATG
GGCCCTTGCA CACGCTGGTT GCGCCCCTAC ATCCACGAGC TGCGCTCGCC AGTGGAGGGC
GCATTGTTCC CACAGGCACT GGCCAGTCTG AACCTGGATC TGGTGCTGGC GCCTGCAGAA
TCCAACCTGA TCAACACGAG CAAAAGCCCG GTGGCCTTGC TGGAGTTCGG TGCGTGTGGC
TTTGCAGTGA TTTGCAGCAA CCTACTGAGC ATTCCTGAAG GCCTGCCCGT CACCCGCGTT
GAAAACAGCA CGGATGCCTG GATAAGTGCC ATCGAGCAAC ACATTGATCA GATGGATGAG
TGCACCCGCA AGGGCGAAGC GCTGAAGCAG GCGGTCATGG ACAACTGGAT GCTGACGGCC
GATCACCTGC AAGGCTGGCG CACTGCCTGG CTGAAGGGCT GA
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| Protein sequence | MSSSRLVSIV IPAYKPAFFE AALASALRQN HDDIEIIITD DCRNDGIKDI VEKLRPTSPW
PILYAKNQTP LGEPHNIAQG IRLASGEYIK FLYDDDILLP DCVRLMFDVL HDSPDIKVVS
ATRKRIDAAG ALLADNLYTV YPFGKNVVLN GPELVSFLAQ YPINFVGEPS AVMCRREDLL
VFGQDIMSLE QVVIWGLGDL AIYAKLLRQG NLAMLARPLS YFRVSDQQSS EAFRKDPTLP
REGHANFTRI PAALGWVRPE ELNGKVKIAP LSQRDNVQEM DLLAYFDRRS DATVRNTRIA
GWLGQRRPTP AQHALLNEYL QQHNGGPTIA IVVSDFNQQP ESVLSTLQSL ASDAPLLDKL
KVFVLADYDR DQQTPLQAQL PWRDASLDNR ATVINELMQD NDHDWWILID AGTTFTPSGL
LCAAMTLIDA PQACAVFGDE VTLHAQAGAH LAFRPDFSLD YLLACPAATS RNWLFNREKA
LAVGGFDSSH AHAIELDLIL RMIEDAGFTE FVHSPEPMII SPLWQAQDNY DQARTIQRHL
HARGYAGGQV HALESGHYRI EYGHADQPLV SILVTSQDQL QTLLPCVESI LENTTYPFYE
ILICDNNSQS AETTEWLATI DSMQSERIRV LRHEQTVSPS ALLNAAASHA LGDYLLTLDS
HGLIIQKDWL DHLLNHALRP EVGVVGAKII STDGNVVGAG IILGLNGTAG AVTASAIAAS
VSYAQRLETD QNYSAVSGSC LMIRKSVYDQ VQGLDEHLFP ARFNDVDLCL KARSAGHLVV
WTPHAIVALR PNEVQHDAEA MDFAARALSH RWLHYMAWDP AYNKNLALTD SFVTQSNQAL
SWRPLVHRPL PVVLAQPCNH SAAGNRIAAT LQSLCSKREA DGVVSYTALP LVEVARLSPD
SVVIQGPIDE NLIASISAIK DHTNAWVTYD LPEFPSYAEV DKSAAPLATV QASLRHGLAR
ADLITVPTSA LAQLLEDSHP NVQVIETRLA PAPWSTLHSE HRTRSKPRVG WVGTASELGN
LLILSEVIKA LADRVEWVIM GPCTRWLRPY IHELRSPVEG ALFPQALASL NLDLVLAPAE
SNLINTSKSP VALLEFGACG FAVICSNLLS IPEGLPVTRV ENSTDAWISA IEQHIDQMDE
CTRKGEALKQ AVMDNWMLTA DHLQGWRTAW LKG
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