| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1886 |
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| Symbol | sdaA |
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| ID | 1183531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2059427 |
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| End bp | 2060803 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393264 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | NP_791709 |
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| Protein GI | 28869090 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0732731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCA GCGTCTTCGA CATGTTCAAA ATCGGCATCG GGCCGTCCAG TTCCCATACT
GTCGGGCCGA TGCGTGCCGG GGCACTGTTC GTGACCGAGC TGCGCAACCA GAACCGGTTG
CATAGCGTAG AACGTATCGA GGTGCGATTG TACGGTTCTC TGTCGGCCAC GGGCATCGGT
CATGGCAGCG ACCGTGCGAC CGTCATGGGC CTGATGGGCG AATGGCCAGA CCAGATCGAC
CCCAGCCAGG TCAACCAACG CATCGACGCC TTGCGCGCCG ACAACCAGCT GATGCTGGCG
GGCGAACAGG CCATCACCTT CGTTTGGGAG CGGGACATGT GCCTGCTCGA CGAAAGCCTG
CCCTACCACC CCAACGGCAT GACCCTGTGC GCCTACGGCA AGACCGGTGA AGTGCACGAG
CAGACCTACT ATTCAGTGGG CGGCGGTTTT GTGATCGATG CCGAACAGGC CGCCAGCGGC
GTGCTGGACA ATGACACCAC CGTGCTGCCC TACGATTTTT TCAGCGGCGC GCAGTTGCTG
AAACTGTGCA AGACCCACGG CATGAGCATT TCCGAACTGA TGATGGCCAA CGAGAAGGTC
TGGCGCAGCG AGGCAGAAAT TCGCGAGAAG ATCATGGTCA TCTGGACGGC AATGCGCGCC
TGTGTGGACA AGGGCCTGCT GGAAACCGGC ATTCTGCCGG GCGGTTTGAA CGTGCGTCGT
CGCGCTTATC GCCTGCACCA GAGCCTGCAA AACCTCGACA ACCCGAACGT GATCGGCTCG
ACCCTGAGTG CCATGGAATG GGTCAACCTG TTCGCCCTGG CGGTCAACGA AGAAAACGCC
GCAGGCGGGC GCATGGTCAC CGCGCCCACC AACGGCGCGG CCGGTATCGT GCCTGCGGTG
CTGCATTACT TCATGAAGTT CAAGCCCACG GCCAATGACG ACGATGTGGT GCGCTTCTTC
CTGAGCGCCG CAGCGGTCGG CATTCTGTGC AAGAAAAATG CGTCGATCTC GGGTGCCGAA
GTGGGTTGTC AGGGTGAAGT CGGCTCGGCC TGCGCCATGG CCGCCGCCGG GCTGGCGGAA
ATTCTCGGTG CGACCCCCGA GCAAGTCGAA AACGCCGCCG AAATTGGCCT GGAACATAAC
CTGGGGCTGA CCTGCGACCC GGTCGGCGGG CTGGTGCAAA TCCCCTGCAT CGAACGTAAC
GCGATTGCTG CCGTGAAGGC CATCAATGCC GCACAAATGG CCCTGCGCGG CGACGGCGAG
CACCACATCT CGCTGGACCA CGCCATCCGC ACCATGCGCG ACACCGGTGC GGATATGCAC
GACAAATACA AGGAAACCTC ACGCGGCGGG CTGGCGGTGA ACCTGATCGA GTGCTGA
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| Protein sequence | MAISVFDMFK IGIGPSSSHT VGPMRAGALF VTELRNQNRL HSVERIEVRL YGSLSATGIG
HGSDRATVMG LMGEWPDQID PSQVNQRIDA LRADNQLMLA GEQAITFVWE RDMCLLDESL
PYHPNGMTLC AYGKTGEVHE QTYYSVGGGF VIDAEQAASG VLDNDTTVLP YDFFSGAQLL
KLCKTHGMSI SELMMANEKV WRSEAEIREK IMVIWTAMRA CVDKGLLETG ILPGGLNVRR
RAYRLHQSLQ NLDNPNVIGS TLSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIVPAV
LHYFMKFKPT ANDDDVVRFF LSAAAVGILC KKNASISGAE VGCQGEVGSA CAMAAAGLAE
ILGATPEQVE NAAEIGLEHN LGLTCDPVGG LVQIPCIERN AIAAVKAINA AQMALRGDGE
HHISLDHAIR TMRDTGADMH DKYKETSRGG LAVNLIEC
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