| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1857 |
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| Symbol | |
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| ID | 1183502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2031166 |
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| End bp | 2032194 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393236 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_791681 |
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| Protein GI | 28869062 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.114565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCCTG CGCACTCCAT AGCAAGTACA CGGCAAATCC GAGGCTGTCT GATGCAATCC
ATTCGTGTTG CTGTTCTGGC TTTCAACGGC GTCAGCCTGT TCCATCTCTC TGTACCCGGC
GTGGTGCTGG GGACGGCCCA GTCTGCACCT GGCGAGCCTC GATACGAGGT CAGCTACTGC
GCGCAGTCGC CGGGAATGAT AAGCAGCGAT CAGGGCATCG GACTGCAAGT CACTCATGGC
CTGGAACTGA TGGCCGCGTG CGACGTAATT GTCATTCCGG CGTGGGGTGA TCAATCGGTT
GCTGCATCTG CACCGCTTGT CAAAGCCCTT CAGCTTGCCA ACGCCCAAGG CAAGCTCATG
GTCGGGTTGT GCCTGGGGGC ATTCGTGCTC GCAGATGCCG GCCTGCTTGA TGGCAAAGAA
GCAACCACTC ACTGGGCAGC GCGAGAAGAG TTTGCTCGAC GCTTCCCTGA CGTGCGTTTC
AGGCCAGAAG TGCTGTATGT CAGTGATGGC AACATCATGA CCTCTGCAGG AACCGTGGCG
GCCATCGATT GCTGCCTGCA TTTGATACGC CAACGGCTCG GTGCCGACGT GGCAAATCAC
ACCGCGAAGA TGCTGGTGAC GCCGCCGCAC AGGCAAGGCG GTCAGGCTCA ATATGTCGAG
CGTCCTGTGC CGCAACTGTC CAGCGAGACG CATTTGTCTG ATGTGCTGGC GTGGGCCAGG
ATGAACCTGT CCAGTGATCT GTCACTCGAC GTCCTGGCAG AGAGGGCGAA AATGAGTAGG
CGCACGTTTA CTCGGCGCTT TCGGGAGACC ACCGGCAGTA CCGTTTCCAG ATGGCTGAAC
GCCGAGCGAG TCGTCAGGGC GCAAGCGCTG CTGGAAACGA CCGATTTACC TATCGAGTGC
GTTGCCGACG AGGCAGGTTT TAGAACGCCT TTATCCTTGA GGCAGCAGTT TACTGTTCAT
CTTGGCACTT CACCTTCGGC GTATCGGCGA ATGTTTTTTC GTCAAATCAA GGCAGAAGAA
AAAGCGTAG
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| Protein sequence | MVPAHSIAST RQIRGCLMQS IRVAVLAFNG VSLFHLSVPG VVLGTAQSAP GEPRYEVSYC
AQSPGMISSD QGIGLQVTHG LELMAACDVI VIPAWGDQSV AASAPLVKAL QLANAQGKLM
VGLCLGAFVL ADAGLLDGKE ATTHWAAREE FARRFPDVRF RPEVLYVSDG NIMTSAGTVA
AIDCCLHLIR QRLGADVANH TAKMLVTPPH RQGGQAQYVE RPVPQLSSET HLSDVLAWAR
MNLSSDLSLD VLAERAKMSR RTFTRRFRET TGSTVSRWLN AERVVRAQAL LETTDLPIEC
VADEAGFRTP LSLRQQFTVH LGTSPSAYRR MFFRQIKAEE KA
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