| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1856 |
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| Symbol | |
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| ID | 1183501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2030104 |
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| End bp | 2031066 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637393235 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_791680 |
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| Protein GI | 28869061 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.922042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTAA AGTCCATCCA ATTCATGACC TACCCTGAAG TTAGCCTGCT GGATCTGGCA
GGCCCTCTGG ATGTGTTTAT TGCTGCCAAC CATCTGGCGC ACCCCGATCC TGCGCCATAC
TCTTTATCCA TCCTCGCCTT AAGCCCGACG ACGGAGATAT TCTCTGATTT CTCGTTGAAC
GCTGCGGTTT TGCTGAAGGA GACGCCTGCC GCGCACACAC TTATCGTGCC TGGCGGGCCC
GGAATACATA AGTTTTGTGA TCACCCCCAA TTTTTTACAC ACTTTGTAAA ACATACCGAA
AAAGTTACGC GTCTGGTCTC TGTGTGCACA GGGATATTTG CGCTGGCCAC CGCTGGAAAG
TTGAATGGAC GAAACGTTAC TACCCATTGG TCGGCCTATG ACAAGCTGGA AAGTGACTTT
CCTTCTGTCA AGGTAAGGCG CGGTCCTATA TTCATAAATG ATGGGGATTT ATGGACTTCA
GCAGGTGTCA CTTCTGGAAT CGATTTGGCT CTTGCAATCG TTGAGGCGGA TTTGGGGCAT
GCTGCTGCGC TCGAGGTTGC ACGGCATCTG GTTGTGTTTC TGAAACGCCC CGGGGATCAG
AACCAGTTCA GCTCATCATT GACTCTGCAA TCCAAGAGCA GTCAGTTTTC AGACCTTCAT
GCCTGGTTGA ACAACAACCT CAGTGGCGAT TTATCCGTGT CAGTGCTAGC AGATTTCATG
AGCATGAGTG AAAGAACATT TGCGCGAAAA TACAGTGAAG TCACAGGCAG TACGCCAAGC
AAAATGGTCG AGCAACTCCG CCTGGAAGCG GCTCGTCATT TGCTGGTCAC TTCAAGTGCT
CCACTCAAGA CAGTCGCCAG CAAGTGCGGT TTGGGCAATG AATCAACCTT TATCCGTAGT
TTTGTAAAAA ACTACGCTGT CACGCCCAGA GAATATAGAG AACGCTTCAA GTCACAGCGC
TGA
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| Protein sequence | MPVKSIQFMT YPEVSLLDLA GPLDVFIAAN HLAHPDPAPY SLSILALSPT TEIFSDFSLN
AAVLLKETPA AHTLIVPGGP GIHKFCDHPQ FFTHFVKHTE KVTRLVSVCT GIFALATAGK
LNGRNVTTHW SAYDKLESDF PSVKVRRGPI FINDGDLWTS AGVTSGIDLA LAIVEADLGH
AAALEVARHL VVFLKRPGDQ NQFSSSLTLQ SKSSQFSDLH AWLNNNLSGD LSVSVLADFM
SMSERTFARK YSEVTGSTPS KMVEQLRLEA ARHLLVTSSA PLKTVASKCG LGNESTFIRS
FVKNYAVTPR EYRERFKSQR
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