Gene PSPTO_1851 details

Gene Information

• Locus tag: PSPTO_1851
• ID: 1183496
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 2021357
• End bp: 2023519
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637393230
• Product: hypothetical protein
• Protein accession: NP_791675
• Protein GI: 28869056

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.445905
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGGCCG AAACAGTCCA GGCTAAAGGC AAGATGCCCG GCCTCGTGAG CGACCTAATA 
TGGGCCACGG CATCAAAAGT CAGATACCTA AGATTTCCAA ACGGGGATAA AGGCCAGGTT 
CGAGGCTACG ATGGCGAACT TGACGCAGAA TCCTCCTCAT CGTTCATCCC GGACGGCAAG 
TCCGTCTGGG AGTTTGGAAC AAGTGGTGCA GGTAAAGCCA AGGCTGAGAG TGACTATAAA 
AAACGCACCA ACGAGGTCGC GCCGGCTGAT CGCGCGAACC TTACGTTGGT GATTGTTACA 
CCTCGAACTT GGGACACCGG AGGAGAGAAA CTCCCTGACT GGCTTGCGGA GAAAAACGCC 
CTAGGGGAGT GGAAAAAAGT TGAGTATCTC GAGGGAACGC GGTTAGAGAA CTGGCTCGCC 
CAGTGCCCGG CCGTCGCGTC GAAATGGGCC AGTTGCGAGC TCAAGCTGAC TCCCCAAATC 
GGAGTTCAGA GCACTGAAGA ATTCTGGCAG TTCTACTCAA GCCGATTCTC ACCCGAACTG 
AAGGAATCGG TATTGCTCGC CAGCCGAGAG GATCAAGCGA AAGAGTTGCT GGAAAAGCTG 
ACTCAAAACA GCGGCCGCCT TGCATTTGCA GCCGACTCTC CTGACGAGGT CATTGCTTTC 
GTCATCGCGG CAATACGTAG CGCACCGGAA CCCATCCGCA ACGTACTGGA GGCCCGCACC 
CTAGTCGTAG AAACGGAAGA AGCCGTCAGG CATTGCTTAA CACTGGACAA TCTTATTTAC 
CTTCCACGAC AAGGCGCTAG GGCTTCGGCA GGGCGACTCG CTCGTGAAGG TGTTACCGTC 
ATCAGTGCCG GGGCAGATGA GAAAAGCCAT GATCACGTTC TCCTTCGCAG GCCAAGCAGC 
AGAGAAATGG GCAAGGCGTT CATGAATATG GGCATGAACG AAGACGCAGG TTACCAACTG 
GCTAGAACAT GTGGCCGCAG CCTAGCGGTT CTGGCTCGAC TGCACCCTAG TGGCACGGCT 
GAAAATCCTG AGTGGATTGA AGATGCTGAC TTGTTGATCC CTGCCCTACT CGCTGGATCC 
TGGATGGCTG ACGTGGAGCC GGATCGCTCA ATCCTGAGTC TGCTCACCCG TAAAGATTAC 
GATGACGCAG AAGAAGAGCT GCTCAAATTT ACCAAGATGC GGGATGCACC ATTAGAGCGC 
ATTGAAGATC TCTGGGCGAT GAAAGCATCA GTGGACGCTT TTGTATACCT AGGGCATCTC 
ATCAGCAGCA AACATCTGGA TCGCTTCAAG GAAGCTGTAA CCTCGGTTTT TTCAAAAGCT 
GCGCAAGCGC ACAAACCTCC TACTGCGGAT CAGCCCTTTT TGATGCCAGG CAGTAGAGAT 
CAAAATCCGC TGCATACTGA CTCCCTAAAA AGCGGCCTTA TGAACACACT GCTGCACATG 
GCCGTGTTAC ATGAGCAAGC GCAGTTCAAA GTCTCACGCT CGAACCCTCA AACTTTCGTT 
GACGAGGTCG TCCGGGGCCT GCCAGGCCTG TCCAGCGATC ACCGGCTCAT TGCGAGTTTA 
GAGCAACAAC TTCCCCTGCT GGCGGAGGCC TCCCCACACC CTTTTCTTGA GGCCCTTGAG 
CGTCAGCTTG AGGGCGACGC CACGATCCGT CCTATCTTCG ACGAATACCC GGGCCTAATC 
ACCCCGACTA CCTATCATTG CGGTTTGTTG TGGTCTCTGG AGGCGCTGGC GTGGCTTCCG 
GATTTCCTAC AACGAGCAGC ACTCTGCCTC GCAAAGCTTG CAGCTCTGGA TCCTGGTGGA 
AAGCTGACGA ACCGGCCCAT CAATAGCCTA CGCTCGATCT TCCTTTCATG GAGTCCCGGC 
ACTGCCGTCA GCACTCAACA TCGGCTCGCG ATTCTTGAGT CGATCATTAA CGACGTCCCC 
TTCATCGCAT GGCCGCTCCT GGAACAACTA CTCCCTCGAT TTAGCGACAC CAGCACGCCG 
ACGACGAAGC CGAGATTCAG AGAGCCCGAA CAGAGAGAGA ACGAAAACCT GACATACGGG 
CTTGTCTGGA AAAGTGAAGA AAGAATCGTT GAGCTCGCGA TAACCCGGGC AGAATATGAT 
CCAGCCCGCT GGGGCTCGCT GATCGACTCT TGGGCTCCGT GCAGGAACCC ACGTTCGAAC 
TGA 

 

Protein sequence

MWAETVQAKG KMPGLVSDLI WATASKVRYL RFPNGDKGQV RGYDGELDAE SSSSFIPDGK 
SVWEFGTSGA GKAKAESDYK KRTNEVAPAD RANLTLVIVT PRTWDTGGEK LPDWLAEKNA 
LGEWKKVEYL EGTRLENWLA QCPAVASKWA SCELKLTPQI GVQSTEEFWQ FYSSRFSPEL 
KESVLLASRE DQAKELLEKL TQNSGRLAFA ADSPDEVIAF VIAAIRSAPE PIRNVLEART 
LVVETEEAVR HCLTLDNLIY LPRQGARASA GRLAREGVTV ISAGADEKSH DHVLLRRPSS 
REMGKAFMNM GMNEDAGYQL ARTCGRSLAV LARLHPSGTA ENPEWIEDAD LLIPALLAGS 
WMADVEPDRS ILSLLTRKDY DDAEEELLKF TKMRDAPLER IEDLWAMKAS VDAFVYLGHL 
ISSKHLDRFK EAVTSVFSKA AQAHKPPTAD QPFLMPGSRD QNPLHTDSLK SGLMNTLLHM 
AVLHEQAQFK VSRSNPQTFV DEVVRGLPGL SSDHRLIASL EQQLPLLAEA SPHPFLEALE 
RQLEGDATIR PIFDEYPGLI TPTTYHCGLL WSLEALAWLP DFLQRAALCL AKLAALDPGG 
KLTNRPINSL RSIFLSWSPG TAVSTQHRLA ILESIINDVP FIAWPLLEQL LPRFSDTSTP 
TTKPRFREPE QRENENLTYG LVWKSEERIV ELAITRAEYD PARWGSLIDS WAPCRNPRSN