Gene PSPTO_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1850 
Symbol 
ID1183495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2019792 
End bp2021390 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content55% 
IMG OID637393229 
Producthypothetical protein 
Protein accessionNP_791674 
Protein GI28869055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.158477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCTCCG TGCAGGAACC CACGTTCGAA CTGATCGTAA ACGGCCTCGG ACAGGTTCTC 
GGTGCTACCC AAGACGAACA GCAATCCGAC ATATGGAATG CACTTCGCAA ACAAACCCTG
CGCCACCGTA AGTATCAAGA CGCGGACTGG GCATTGCCCT CTGACAGTAT CGAAACGCTC
GAGGCTTTGA TCGAAAGACA CAAGCCCGCA GCTTTGGTGG AATCTATAAG CTGGCTCTTC
GACGATTGGA TGCCCTCGTT CGATTTGGGC GATCAGACCT CCGACCCAAT TCAGGCGGTG
GAGGACGCCC GCCTGGCAGC TCTCAGGGGC ATCATGGATG CGACGGGAAT CGATGGCGTG
GTGGGTTTGA TGGAGCGCGT TAAGGTTCCT CGCTTGGTGA TGTTCTCGAT TCGCGGCCTA
CAGCTTCCTG ATAACCAGCT TCTGCAACTG CTCACCAGGC TGCTCTCAAG CACCATTGGC
GAGTCAGCCC TCGCTGCAAG CATCGTCTTG GCACATGGTA TGGAACGGTT TGGTGACAGT
TGGGCCACAG ATGCAAAGGA CGCTCTGCAG AAGAGTGGCT GGGATCATCA GAAGTGCGCT
CTCGTGCTTT TGGGACTGGA TGAAACCAAG GAAAGCTGGA ATTACGTCAC GTCTTTTGGG
AATGAGACGG AGGCAGCGTA CTGGAGCCAA AAATCGCCTA TCAGGATCAA CGGGCCGCTA
GAAGATCTCA CATTTGCCAT CGAAAAATAT CGCTCAGTGG GGCGATCTGC AGCAGCCCTG
GCCGCAGCAG AGAAACGATT GGAGGAGCTT TCCGTCGCAA CGACTCAGGC GATCATGTCG
TCTGCAGTGT CTGAACATAA CGCAGATCCA GAGGCGAAAA GCACATTTGG ATTTCTAGAC
GTAGACAGGA TTTTCTCCGC ATTAGCGCAA AGATCTGACC TCCCACGGGA AAGCCTGGCA
GCACTGGAGT TCATGTACCT TCCCATGCTC CGTACCGATA ACCTTACGAT CCATGAGCTT
TTGCTGGAGC AGCCAGTGTT CTTTATGGGC ATGGTTAGCA GGGTATTTCG AGCCAAAGAC
GAAGAGCCTC GAGATCTTTC CGAAACGGAT AGAAAGCTGG CAACCGCTAC CTATCGGCTA
CTCAAGGGGC TAAAGAAGCT GCCAGGTCAG AAAGGAAACG ACGTGGATGA AGCTGCTCTG
AGGACTTGGT GCGTAGATGT CCGAAAACTG GCGCAGGAAT CGAACAGGGG TATGGTCACA
GATCAACTGA TTGGACAAAT ACTGGCACAC GCCCCGCTTG GAGCGAAGGA CTCGGCATGG
CCTCACGAGG CCGTCAGAAA CGTCATTGAA GTTTTGGCAT CGCCTGAGGT TGAGCGAGGC
ATCAGCCTCG AACGTTACAA CATGCGCGGG GTGTACAGCA AAATGCCGGA TGAGGGCGGG
GATCAGGAAC GCGCCCTCGC CTCTCAATCG CGTGAGTGGG CTGCGAAAAC GATAACATCA
GTGAGAACGT CAGCAATGCT CCGCAGGATT GCTGAAGGCT GGGAAGCCGA TGCGGAGCGG
GCAGATATTG CTGCTGCTCA GCGAGCTACG CGTTGGTAG
 
Protein sequence
MGSVQEPTFE LIVNGLGQVL GATQDEQQSD IWNALRKQTL RHRKYQDADW ALPSDSIETL 
EALIERHKPA ALVESISWLF DDWMPSFDLG DQTSDPIQAV EDARLAALRG IMDATGIDGV
VGLMERVKVP RLVMFSIRGL QLPDNQLLQL LTRLLSSTIG ESALAASIVL AHGMERFGDS
WATDAKDALQ KSGWDHQKCA LVLLGLDETK ESWNYVTSFG NETEAAYWSQ KSPIRINGPL
EDLTFAIEKY RSVGRSAAAL AAAEKRLEEL SVATTQAIMS SAVSEHNADP EAKSTFGFLD
VDRIFSALAQ RSDLPRESLA ALEFMYLPML RTDNLTIHEL LLEQPVFFMG MVSRVFRAKD
EEPRDLSETD RKLATATYRL LKGLKKLPGQ KGNDVDEAAL RTWCVDVRKL AQESNRGMVT
DQLIGQILAH APLGAKDSAW PHEAVRNVIE VLASPEVERG ISLERYNMRG VYSKMPDEGG
DQERALASQS REWAAKTITS VRTSAMLRRI AEGWEADAER ADIAAAQRAT RW