Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1843 |
Symbol | |
ID | 1183484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2013155 |
End bp | 2014387 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393218 |
Product | aspartate kinase, monofunctional class |
Protein accession | NP_791667 |
Protein GI | 28869048 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.369756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTGA TCGTACAGAA ATTTGGCGGC ACCTCCGTGG GCTCTGTAGA GCGCATCGAG CAGGTGGCCG ACAAGGTCAA GAAATTCCGT GAGGCGGGCG ACGACCTGGT GGTCGTGCTG TCAGCCATGA GCGGTGAAAC AAATCGTTTG ATCGAGCTGG CCAGGCAGAT CAGTGATCAG CCGGTTCCCC GTGAACTGGA CGTGATCGTC TCCACGGGCG AGCAAGTGAC CATTGCGCTG CTGGCGATGG CGCTGATGAA GCGCGGCGTG CCTGCGGTTT CCTACACCGG CAACCAGGTG CGCATTCTCA CTGACAGCGC GCACAACAAG GCGCGCATCC TGCAAATCGA CGACCAGAAG ATTCGTTCCG ACCTGAAAGC CGGTCGGGTG GTGGTGGTTG CCGGTTTCCA GGGTGTCGAT GAGCACGGCA ATATCACCAC GCTTGGGCGT GGCGGCTCTG ACACCACCGG AGTGGCCCTG GCGGCTGCGC TGAAGGCTGA CGAGTGCCAG ATCTACACCG ACGTCGATGG TGTGTACACC ACCGACCCAC GTGTGGTGTC GCAGGCTCAG CGTCTGGACA AGATCACCTT TGAAGAGATG CTGGAAATGG CCAGCCTCGG TTCCAAGGTG TTGCAGATCC GCGCGGTCGA GTTCGCCGGT AAATACAACG TCCCGCTGCG CGTCCTGCAC AGCTTCAAAG AGGGGCCGGG CACCCTTATT ACAATCGATG AAGAGGAATC CATGGAACAG CCGATCATTT CCGGCATCGC CTTCAACCGC GATGAAGCCA AGCTGACCAT CCGTGGTGTG CCAGACACCC CCGGCGTGGC GTTCAAGATT CTCGGCCCGA TCAGCGCGGC CAATATCGAA GTGGACATGA TCGTGCAGAA CGTTTCGCAC GATAACACCA CCGATTTCAC CTTCACGATC CATCGCAACG ACTATCAGGC GGCCTTGCAG GTGCTTGAGA CGACCGCGCG TGAAATCAGT GCCCGTGAAG TTTCCGGCGA TACCAAGATT GCCAAGGTGT CCATCGTCGG TGTCGGCATG CGCTCGCACG CGGGTGTCGC CAGTCGCATG TTTGAAGCAC TGGCCAAGGA GAGCATCAAT ATCCAGATGA TCTCCACATC GGAGATCAAG GTCTCTGTGG TCATCGAAGA GAAGTACCTG GAGCTGGCTG TGCGCGCATT GCACACCGCG TTCGAGCTGG ATGCTCCTCG GCAGGGTGAA TGA
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Protein sequence | MALIVQKFGG TSVGSVERIE QVADKVKKFR EAGDDLVVVL SAMSGETNRL IELARQISDQ PVPRELDVIV STGEQVTIAL LAMALMKRGV PAVSYTGNQV RILTDSAHNK ARILQIDDQK IRSDLKAGRV VVVAGFQGVD EHGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT TDPRVVSQAQ RLDKITFEEM LEMASLGSKV LQIRAVEFAG KYNVPLRVLH SFKEGPGTLI TIDEEESMEQ PIISGIAFNR DEAKLTIRGV PDTPGVAFKI LGPISAANIE VDMIVQNVSH DNTTDFTFTI HRNDYQAALQ VLETTAREIS AREVSGDTKI AKVSIVGVGM RSHAGVASRM FEALAKESIN IQMISTSEIK VSVVIEEKYL ELAVRALHTA FELDAPRQGE
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