Gene PSPTO_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1843 
Symbol 
ID1183484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2013155 
End bp2014387 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content59% 
IMG OID637393218 
Productaspartate kinase, monofunctional class 
Protein accessionNP_791667 
Protein GI28869048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.369756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGA TCGTACAGAA ATTTGGCGGC ACCTCCGTGG GCTCTGTAGA GCGCATCGAG 
CAGGTGGCCG ACAAGGTCAA GAAATTCCGT GAGGCGGGCG ACGACCTGGT GGTCGTGCTG
TCAGCCATGA GCGGTGAAAC AAATCGTTTG ATCGAGCTGG CCAGGCAGAT CAGTGATCAG
CCGGTTCCCC GTGAACTGGA CGTGATCGTC TCCACGGGCG AGCAAGTGAC CATTGCGCTG
CTGGCGATGG CGCTGATGAA GCGCGGCGTG CCTGCGGTTT CCTACACCGG CAACCAGGTG
CGCATTCTCA CTGACAGCGC GCACAACAAG GCGCGCATCC TGCAAATCGA CGACCAGAAG
ATTCGTTCCG ACCTGAAAGC CGGTCGGGTG GTGGTGGTTG CCGGTTTCCA GGGTGTCGAT
GAGCACGGCA ATATCACCAC GCTTGGGCGT GGCGGCTCTG ACACCACCGG AGTGGCCCTG
GCGGCTGCGC TGAAGGCTGA CGAGTGCCAG ATCTACACCG ACGTCGATGG TGTGTACACC
ACCGACCCAC GTGTGGTGTC GCAGGCTCAG CGTCTGGACA AGATCACCTT TGAAGAGATG
CTGGAAATGG CCAGCCTCGG TTCCAAGGTG TTGCAGATCC GCGCGGTCGA GTTCGCCGGT
AAATACAACG TCCCGCTGCG CGTCCTGCAC AGCTTCAAAG AGGGGCCGGG CACCCTTATT
ACAATCGATG AAGAGGAATC CATGGAACAG CCGATCATTT CCGGCATCGC CTTCAACCGC
GATGAAGCCA AGCTGACCAT CCGTGGTGTG CCAGACACCC CCGGCGTGGC GTTCAAGATT
CTCGGCCCGA TCAGCGCGGC CAATATCGAA GTGGACATGA TCGTGCAGAA CGTTTCGCAC
GATAACACCA CCGATTTCAC CTTCACGATC CATCGCAACG ACTATCAGGC GGCCTTGCAG
GTGCTTGAGA CGACCGCGCG TGAAATCAGT GCCCGTGAAG TTTCCGGCGA TACCAAGATT
GCCAAGGTGT CCATCGTCGG TGTCGGCATG CGCTCGCACG CGGGTGTCGC CAGTCGCATG
TTTGAAGCAC TGGCCAAGGA GAGCATCAAT ATCCAGATGA TCTCCACATC GGAGATCAAG
GTCTCTGTGG TCATCGAAGA GAAGTACCTG GAGCTGGCTG TGCGCGCATT GCACACCGCG
TTCGAGCTGG ATGCTCCTCG GCAGGGTGAA TGA
 
Protein sequence
MALIVQKFGG TSVGSVERIE QVADKVKKFR EAGDDLVVVL SAMSGETNRL IELARQISDQ 
PVPRELDVIV STGEQVTIAL LAMALMKRGV PAVSYTGNQV RILTDSAHNK ARILQIDDQK
IRSDLKAGRV VVVAGFQGVD EHGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT
TDPRVVSQAQ RLDKITFEEM LEMASLGSKV LQIRAVEFAG KYNVPLRVLH SFKEGPGTLI
TIDEEESMEQ PIISGIAFNR DEAKLTIRGV PDTPGVAFKI LGPISAANIE VDMIVQNVSH
DNTTDFTFTI HRNDYQAALQ VLETTAREIS AREVSGDTKI AKVSIVGVGM RSHAGVASRM
FEALAKESIN IQMISTSEIK VSVVIEEKYL ELAVRALHTA FELDAPRQGE