Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1808 |
Symbol | |
ID | 1183449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1978400 |
End bp | 1978699 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393184 |
Product | hypothetical protein |
Protein accession | NP_791633 |
Protein GI | 28869014 |
COG category | [S] Function unknown |
COG ID | [COG2350] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCTACG CAATCATCGC CACTGACGTC GAAAACTCGC TGGAAAAGCG CTTGAGTGTA CGCCCTGCAC ACCTTGAACG CCTGAACACG CTCAAGGATG CCGGCCGCTT GGTACTGGCC GGCCCACACC CGGCGGTCGA GAGCAACGAT CCGGGCGCTG CCGGTTTCAG CGGCAGCCTG GTTGTCGCCG AGTTCGAATC CTTGAGCGCA GCGAAAACCT GGGCCGAAGC CGACCCGTAC GTCTCAGCTG GCGTCTACGC CAACGTCGTG GTCAAGCCGT TCAAGCAAGT CCTGCCCTGA
|
Protein sequence | MLYAIIATDV ENSLEKRLSV RPAHLERLNT LKDAGRLVLA GPHPAVESND PGAAGFSGSL VVAEFESLSA AKTWAEADPY VSAGVYANVV VKPFKQVLP
|
| |