Gene PSPTO_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1791 
Symbol 
ID1183432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1963078 
End bp1964067 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID637393167 
ProductABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family 
Protein accessionNP_791616 
Protein GI28868997 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCTT TTTTCAAATC CGCCCTGCCC CTTAAAGCCC TGCTGCTGGG CGCGTTGCTC 
AGCCTACTGG CAGGGCAGCA GGTGGTGGCT GCCGAACAGG CACCGCTGCG GGTGGCCAAT 
CAGAAGTCGC TGCTGAAAAC ACTGCTGCAA GTCTCCGGTG AACTCAAGGA TGTGCCTTAC 
GAGATTCAGT TTTCGGAGTT TCCTTCCGCC GCACCGCTGG GTGAGGCGCT GAATGCTGGC 
GCGGTGGACA TCGGTGCGCT GGGCGATGCA CCTTATGTGT TCGCGCTCGG CGCCGGTGCG 
CCACTGAAAG TGGTCAGCAT CACCCACGCT CAGGGCCGCT TCACCACGGC GGTGCTGGTG 
CCCAAAGATT CGCCGATCAA GACCGTGGCC GATCTCAAGG GCAAACGTAT CGTCACCGGG 
CGCGGCTCCA TCGGCCATTA CCTGGCGATT CGCGCCCTGC ACCAAGCAGG TCTGAAAACC 
AGCGACGTGA CCTTCATCAA TATGCTGCCC AGCGAATCAC GCCTGCTGCT GGACAGCGGC 
GACGCCGATG CCTGGGCAAC CTGGGACCCT TACACCACGA TTTCCATCAC CCAGAGCGAC 
GCACGCGTAC TGGTCAGTGG CAGCGAACTG CTGAGCAATC ACCTGTACCT GGCGGCAACC 
AGCAAAGCCA TCGAAAGCAA ACGCGCTCAG CTGGACGATT TTGTGGCCAG GGTCGAGCGC 
GCCTTCAATT GGTCCAACGC CCATCCGGAA GAATACGCAG CCGCTCAAGC GAAGGTCACC 
GGCCTGCCGC TGGCGGTGCA TCTGGCAGTG GCCAACGCGA CGAAGATGCA GCGCACGCCG 
ATTGACGATC AGATCATCCA GGGCCTGCAA AACACCGCTG ACACCTATCT GGCTGAGGGC 
ATCCTGACCA GAAAAATCGA TGTTTCAACA GGCTTCGACA AGCGCTTCAA CGCTTCGCGC 
GCAGAGATTG CTCAGGCCGC CGCTCGATAA
 
Protein sequence
MLPFFKSALP LKALLLGALL SLLAGQQVVA AEQAPLRVAN QKSLLKTLLQ VSGELKDVPY 
EIQFSEFPSA APLGEALNAG AVDIGALGDA PYVFALGAGA PLKVVSITHA QGRFTTAVLV 
PKDSPIKTVA DLKGKRIVTG RGSIGHYLAI RALHQAGLKT SDVTFINMLP SESRLLLDSG 
DADAWATWDP YTTISITQSD ARVLVSGSEL LSNHLYLAAT SKAIESKRAQ LDDFVARVER 
AFNWSNAHPE EYAAAQAKVT GLPLAVHLAV ANATKMQRTP IDDQIIQGLQ NTADTYLAEG 
ILTRKIDVST GFDKRFNASR AEIAQAAAR