Gene PSPTO_1749 details

Gene Information

• Locus tag: PSPTO_1749
• Symbol: cmk
• ID: 1183386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1920306
• End bp: 1920995
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637393121
• Product: cytidylate kinase
• Protein accession: NP_791574
• Protein GI: 28868955
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00238031
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAATCA AAGCACCCGT TATCACCATC GACGGACCTA GCGGTTCAGG AAAAGGCACT 
GTAGCCGGGC TGCTGGCCAA GAAACTTGGC TGGTGCCTGC TTGATTCCGG CGCGCTATAC 
CGCCTGCTGG CCTTCGCTGC GCGCAATCAT GGCGTCGACC TGACCAACGA AGAAGCGCTC 
AAATTGCTTG CCGCTCATCT GGATGTTCAG TTCGAAACGA CAGCGGCGGG GCAGGGGCAG 
CGCATCATTC TTGAAGGTGA GGACGTTACC CAGGCCATTC GCAACGAGCA GATCGGCAGT 
GGCGCATCTC AGGTGGCGTC TTTGCCCGCT GTGCGCGATG CCTTGCTGAT GCGCCAGCGC 
GCCTTTCAGG AAGAGCCGGG GCTTGTCGCA GACGGTCGCG ACATGGGCAC GGTCGTGTTT 
CCCGACGCCC CGCTGAAGGT ATTCCTTACC GCGAGTGCCG AGGAACGTGC ACGCCGACGT 
TACTTGCAGT TGAAGGCCAA GGGCGATGAT GTTAGTCTGT CGAGTCTGCT AGATGAGATA 
TGTGCACGCG ACGAGCGTGA CACCCAGCGA GCGGTAGCAC CGCTAAAGCC GGCGCACGAC 
GCCATACAGC TGGATTCCAC TGAATTGTCC ATCGAACAGG TGCTGGAACG CATTCTGAGT 
GAAATCGCGC TTCGCGATAT CGCCGGGTGA 

 

Protein sequence

MKIKAPVITI DGPSGSGKGT VAGLLAKKLG WCLLDSGALY RLLAFAARNH GVDLTNEEAL 
KLLAAHLDVQ FETTAAGQGQ RIILEGEDVT QAIRNEQIGS GASQVASLPA VRDALLMRQR 
AFQEEPGLVA DGRDMGTVVF PDAPLKVFLT ASAEERARRR YLQLKAKGDD VSLSSLLDEI 
CARDERDTQR AVAPLKPAHD AIQLDSTELS IEQVLERILS EIALRDIAG