| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1745 |
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| Symbol | gyrA |
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| ID | 1183382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1913484 |
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| End bp | 1916270 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393117 |
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| Product | DNA gyrase, subunit A |
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| Protein accession | NP_791570 |
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| Protein GI | 28868951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.6885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAAC TGGCCAAAGA AATCCTCCCG GTCAATATCG AAGACGAGCT GAAGCAGTCC
TACCTCGACT ACGCAATGAG CGTAATCGTC GGTCGGGCAC TGCCCGATGC GCGCGACGGC
TTGAAGCCCG TGCACCGGCG CGTGTTGTTC GCAATGAGCG AGCTGGGTAA CGACTGGAAC
AAGCCGTACA AGAAATCCGC CCGTGTGGTT GGTGACGTGA TCGGTAAGTA TCACCCACAC
GGCGACACCG CCGTGTACGA CACCATCGTT CGTATGGCTC AGCCATTCTC GCTGCGCTAC
CTGCTGGTAG ACGGCCAGGG CAACTTCGGT TCGGTCGACG GCGACAACGC GGCGGCCATG
CGATACACCG AAGTGCGCAT GACCAAGCTG GCTCACGAGC TGCTGGCCGA CCTGCACAAA
GAGACCGTCG ACTGGGTGCC GAACTACGAC GGCACCGAAA TGATCCCTGC GGTCATGCCG
ACCCGTATTC CCAACCTGCT GGTCAACGGC TCGAGCGGTA TCGCCGTGGG CATGGCGACC
AACATTCCGC CGCACAACCT CGGTGAAGTC ATCGACGGTT GCCTGGCGCT GATCGACAAC
CCCGAGTTGA CGATCGACGA ACTGATGCAG TACATCCCCG GCCCGGACTT CCCGACGGCG
GCGATCATCA ACGGCCGCGC CGGCATCATC GAAGCCTACC GCACCGGCCG CGGGCGCATT
TACATGCGTG CCCGCTCCAT CGTCGAAGAC ATCGACAAGG TCGGCGGTCG CCAGCAGATC
GTCATCACCG AGCTGCCTTA CCAGTTGAAC AAGGCGCGTC TGATCGAAAA GATCGCCGAG
CTGGTCAAGG AAAAGAAACT CGAAGGCATC ACCGAACTGC GCGACGAGTC CGACAAGGAC
GGTATGCGCG TGGTCATCGA GCTGCGTCGT GGCGAAGTGC CTGAGGTTGT GCTCAACAAC
CTGTATGCCC AGACCCAGCT GCAAAGCGTT TTCGGTATCA ACATCGTTGC CCTGATCGAC
GGTCGTCCGC GCATCCTGAA CCTCAAGGAC CTGCTGGAAG CCTTCGTGCG TCACCGCCGC
GAAGTGGTCA CCCGCCGTAC CGTGTTCGAA CTGCGCAAGG CGCGCGAGCG TGGCCACATC
CTTGAAGGTC AGGCGGTTGC GCTGTCCAAC ATCGATCCGG TCATTGCCCT GATCAAGGCG
TCCCCGACAC CTGCCGAAGC CAAGGAGGCG CTGATCAAGA CGCCTTGGGA ATCGAGCGCA
GTGGTCGAGA TGGTCGAGCG CGCCGGTGCC GATTCGTGCC GCCCCGAGAA CCTCGACCCG
CAATACGGCC TGCGTGAAGG CAAGTATTTC CTGTCGCCAG AACAGGCTCA GGCCATTCTG
GAACTGCGTC TGCACCGCCT GACCGGTCTG GAACACGAAA AACTGCTGGG TGAGTACCAG
GAAATCCTGG CTCAGATCGG CGAGCTGATC CGCATCCTCA ACAGCGCCAC GCGCCTGATG
GAAGTGATCC GCGAAGAGCT CGAACTGATC CGCGCCGAAT ACGGCGATGC GCGTCGCACC
GAGATTCTCG ATGCACGCCT GGACCTCACC CTCGGTGACC TGATCACCGA AGAAGAGCGC
GTGGTCACCA TCTCCCACGG CGGCTATGCC AAGACCCAGC CATTGGCTGT CTACCAGGCT
CAGCGTCGCG GCGGCAAGGG CAAGTCGGCC ACCGGCATCA AGGATGAGGA CTACATCGCT
CACCTGCTGG TCGCCAACAG CCACACCACG CTGTTGATGT TCTCCAGCAA GGGCAAGGTG
TACTGGCTCA AGACCTACGA GATCCCGGAA GCGTCCCGCG CTGCCCGTGG TCGTCCGCTG
GTCAACCTGC TGCCGCTGAG CGAAGGTGAA TACATCACCA CCATGCTGCC GGTCGATCTC
GAAGCCATGC GCAAGCGTGC CGACGAAGAA GGCGAAGCCC TCGAAGGCGA GCTGGACGAC
GCGGAAAACA GCAGCGAGAC CGAAGAAGAG CGCAAGGCGC GCATCAAGGC TGCCGACAAG
AAGAAGGCGC CGTTCATCTT CATGTCCACG GCCAACGGCA CGGTCAAGAA GACTCCGCTG
GTGGCCTTCA GTCGTCAGCG TAGCGTCGGC CTGATCGCGC TGGAACTCGA CGAAGGTGAC
ATCCTGATTT CCGCAGCCAT CACCGATGGC GAGCAGGAAA TCATGCTGTT CTCCGACGGC
GGCAAGGTCA CCCGCTTCAA GGAATCCGAC GTTCGCGCCA TGGGCCGTAC GGCTCGCGGT
GTGCGTGGCA TGCGTCTGCC AGAAGGGCAG AAGCTGATTT CAATGCTGAT CCCGGAAGAA
GGCAGCCAGA TCCTCACCGC TTCCGAGCGT GGTTTCGGCA AGCGTACCGC CATTTCCGAG
TTCCCTGAGT ACAAGCGTGG CGGTCAGGGC GTTATCGCCA TGGTCAGCAA CGAGCGTAAC
GGCCGTCTGG TCGGCGCGGT TCAGGTGCTG GATGGTGAGG AAATCATGCT GATTTCCGAC
CAGGGCACAC TGGTTCGTAC CCGCGTCGGC GAAGTCTCCA GCCTGGGTCG TAACACCCAG
GGCGTGACCC TGATCAAGCT GGCCAGCGAC GAAAAACTGG TCGGCCTGGA ACGCGTTCAG
GAGCCCTCGG AAGTCGAAGG CGAAGAGCTT GAGGGTGACG AGGTTGTTGA TGGCGTGATC
GTTGATGTGG ACGGCGCCGA CGCAGACGAG GCAGGTGAAG ACCTGCAGGC GGACGCGGCC
CCGGACGACG ACGAACCGCA GAACTGA
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| Protein sequence | MGELAKEILP VNIEDELKQS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMSELGNDWN
KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY LLVDGQGNFG SVDGDNAAAM
RYTEVRMTKL AHELLADLHK ETVDWVPNYD GTEMIPAVMP TRIPNLLVNG SSGIAVGMAT
NIPPHNLGEV IDGCLALIDN PELTIDELMQ YIPGPDFPTA AIINGRAGII EAYRTGRGRI
YMRARSIVED IDKVGGRQQI VITELPYQLN KARLIEKIAE LVKEKKLEGI TELRDESDKD
GMRVVIELRR GEVPEVVLNN LYAQTQLQSV FGINIVALID GRPRILNLKD LLEAFVRHRR
EVVTRRTVFE LRKARERGHI LEGQAVALSN IDPVIALIKA SPTPAEAKEA LIKTPWESSA
VVEMVERAGA DSCRPENLDP QYGLREGKYF LSPEQAQAIL ELRLHRLTGL EHEKLLGEYQ
EILAQIGELI RILNSATRLM EVIREELELI RAEYGDARRT EILDARLDLT LGDLITEEER
VVTISHGGYA KTQPLAVYQA QRRGGKGKSA TGIKDEDYIA HLLVANSHTT LLMFSSKGKV
YWLKTYEIPE ASRAARGRPL VNLLPLSEGE YITTMLPVDL EAMRKRADEE GEALEGELDD
AENSSETEEE RKARIKAADK KKAPFIFMST ANGTVKKTPL VAFSRQRSVG LIALELDEGD
ILISAAITDG EQEIMLFSDG GKVTRFKESD VRAMGRTARG VRGMRLPEGQ KLISMLIPEE
GSQILTASER GFGKRTAISE FPEYKRGGQG VIAMVSNERN GRLVGAVQVL DGEEIMLISD
QGTLVRTRVG EVSSLGRNTQ GVTLIKLASD EKLVGLERVQ EPSEVEGEEL EGDEVVDGVI
VDVDGADADE AGEDLQADAA PDDDEPQN
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