Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1717 |
Symbol | cobS |
ID | 1183354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1886539 |
End bp | 1887270 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637393089 |
Product | cobalamin (5'-phosphate) synthase |
Protein accession | NP_791542 |
Protein GI | 28868923 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0448036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCGT TCTGGATCGC CCTGCAATTT CTCGGCAGCC TGCCCATCCG TCTGCCCGGC ATGCCGCGCC CCGCAGAGCT GGGCCGCTCG CTGTTGTTCT ATCCGCTGGT GGGCGTGGTG TTCGGCACGT TGCTGCTGGG TTTTAACGCA CTGCTCAGCG GTGCGCCGCT GCTGCTGCAT GCCGCGCTGC TGCTCAGTGC CTGGGTGCTG CTCAGCGGCG GTTTGCACCT GGACGGTCTG GCCGACAGTG CCGATGCCTG GCTGGGCGGC TTCGGTGATC GCGAACGCAC GCTGAACATC ATGAAAGACC CACGCAGCGG GCCTATTGCA GTCGTCACGC TGGTAGTGGT GCTGCTGCTC AAATTTGCCG CCATTGTGGC GCTGATCGAA AGCCACAACA GCATCGGGTT ACTGCTGGCA CCGCTGATCG GGCGCAGCGC AATGCTCGCC TTGTTCCTCG GCACGCCCTA CGTGCGTTCC GGCGGGCTGG GGCAGGCGCT GGCCGATCAT CTGCCGCGCA GCCTCGGGCG TAAGGTGTTG CTGGTCAGTA CGGTCGCGTG TGTGGTGCTG GCCGGTTGGT CTGGAATAGC GGCGCTGCTG GTCTGCGCGG TGTGTTTCTA CTGGTTGCGG CACATGATGA TGCGCCGTCT GGGCGGCAGT ACGGGCGACA CGGCCGGGGC GTTGCTCGAG TTGTTGGAGC TGGCAGTAGT ACTGACCCTG GCATTGCTTT AA
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Protein sequence | MLPFWIALQF LGSLPIRLPG MPRPAELGRS LLFYPLVGVV FGTLLLGFNA LLSGAPLLLH AALLLSAWVL LSGGLHLDGL ADSADAWLGG FGDRERTLNI MKDPRSGPIA VVTLVVVLLL KFAAIVALIE SHNSIGLLLA PLIGRSAMLA LFLGTPYVRS GGLGQALADH LPRSLGRKVL LVSTVACVVL AGWSGIAALL VCAVCFYWLR HMMMRRLGGS TGDTAGALLE LLELAVVLTL ALL
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