Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1710 |
Symbol | |
ID | 1183347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1880384 |
End bp | 1881034 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393082 |
Product | nitroreductase family protein |
Protein accession | NP_791535 |
Protein GI | 28868916 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGC ACGCCTTCAG CGCCGAAGAA CGGGCTGCGG TGTACCGCGC CATCGCCGAG CGCCGTGATA TGCGCCATTT CAGCGGCGGC ACGGTGGCGC CCGAACTGCT GGCGCGCTTG CTGGAAGCCG CGCATCAAGC GCCCAGCGTT GGCCTGATGC AGCCGTGGCG TTTCATCCGC ATCAGTGACC CGGCATTGCG CAGCAAGATG CAGGCGCAGG TTGAAGAAGA GCGCATCCGC ACTGCCGAAG CACTGGGCGA GCGCACCGAC GCGTTCATGA AGCTCAAGGT CGAGGGCATC AATGACTGCG CGGAAGTGCT GGTCGCCGCG CTGATGGAAG GTCGTGAGCA GCATATCTTT GGCCGTCGCA CCTTGCCGGA AATGGACATG GCTTCGTTGT CCTGCGCCAT TCAGAACCTC TGGCTGGCCT CGCGTGCCGA AGGGCTGGGC ATGGGCTGGG TGTCGCTGTT CGACCCTGAT GCGCTGGCCG CGCTGTTGAA CATGCCTGAA GGTGCCAAGC CGCTGGCGAT CATCTGCCTG GGGCCGGTGA ACGCATTTTA TCCTGCACCG ATGCTGGTCA TGGAGGGCTG GGCGCAGGCG CGTCCGCTGC ATGAACTGCT GTATGAAAAT CAATGGGGAG TGAGTCAATG A
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Protein sequence | MTEHAFSAEE RAAVYRAIAE RRDMRHFSGG TVAPELLARL LEAAHQAPSV GLMQPWRFIR ISDPALRSKM QAQVEEERIR TAEALGERTD AFMKLKVEGI NDCAEVLVAA LMEGREQHIF GRRTLPEMDM ASLSCAIQNL WLASRAEGLG MGWVSLFDPD ALAALLNMPE GAKPLAIICL GPVNAFYPAP MLVMEGWAQA RPLHELLYEN QWGVSQ
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