Gene PSPTO_1656 details

Gene Information

• Locus tag: PSPTO_1656
• ID: 1183293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 1820528
• End bp: 1822417
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637393028
• Product: hypothetical protein
• Protein accession: NP_791481
• Protein GI: 28868862
• COG category: [S] Function unknown
• COG ID: [COG1479] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.268829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCCG AAACGCTCAC CGTGCGCCAA ATATTCCAGG ACAGGCGCCA ATATTGTGTT 
CCCTTCTACC AACGAGCGTA TGTATGGACA CAGCGGAACC AATGGACCGG CCTGTGGCAG 
GACATTCAAG AGAAAGCCAA TGCTCGTGTG TCGGGCATGA ACATCACCCC ACACTTTTTA 
GGTGCGGTTG TGCTGGAGCC TCAAGTCAAG CATGGACTGA TGGGTGTCGA CACGTTGCAC 
ATCATCGATG GCCAGCAGCG CCTAACGACG CTCCAATACA TCCTGGCTTC ACTGCTGCTC 
GCCCTGCGCG AAACCGGCAT GCAAGTGTTT GAGCCCAGCG TGATCGCCTG CATGCAAAAC 
ACCAATGAAG AAACCATGCG CAATCCGCAG ATGGAGCGCT TCAAGCTGTG GCCGACGTTT 
CGGGATCGCC CGCACTTCGA AAAGAGCCTG GCGATCCAGC AGCTTGAGGA TTTCCGAAAA 
GAGTTTTCAG CACACTTCAC GCAGCACGGC ACGCTTCGAA AACACTATGA CCATCCGCCA 
TCACTGGCAG CCCTCTGGTT CTTTACCGCA GAGTTCATCG AGTGGATTCG CTCTGGTGTC 
GACCAAGAAC TAAGTTACGC CGAAGCGCTC ATCATGGCCG TTCTGCAAGA TCTAAAGCTG 
GTCAGTATTT CACTGGAGGC CGAGGACGAC GCCCAGGTAA TCTTTGAGAC CCTCAACGGC 
CGCGGGGCTG AGCTACACGC CACTGATTTG ATCCGCAACT ATATCTTCAT GCGTGCAGAC 
CACGACGGTG TGGATGCGGC AGCCCTTTAC AATAGTCAAT GGTTGCCATT CGAATCAGAC 
TACTGGTCGA CGAAGCAACG ACGTGGCCGC ATCAATAAGC CACGGCTTGA ATGGCTGATC 
CATTCGACAC TTCAAGCGGA GATGGGTAGC GAGATTGACC TGTCGCGCCT GTACAACGAG 
TACAGACGCT ACGCTGCCGC TAGCCCCCTA CCCAAAACAG CTGGCCGGCA ACTGTTAACG 
TTAAACCAAT ACGCTGGGCA CTATCGCGAT TTGATCAGCA TGTCTGGCTC ATCACCTGTC 
GCCCGTCTTG GTCGTCGAAT CGCGGCCTAT GATGTCACCA CGCTGCACCC ACTGACGTTG 
CTGATTTCAG TGGCGGAGGT GGGTGATGCG GAAAAAACAC AAATGTTCAA TGACCTCGTG 
TCCTACATCG TGCGACGAGC GATATGTGGG CTTACTCCAA AGAACTACAA CAACGTGTTT 
TTGAGCGCTC TACGCCACTT GACGAAGTCC GGCATATCGA GCGAGGAATT GAGAAGCTAC 
CTTGGTACGC TCAAAGGAGA TGCCTCCCGC TGGCCCGAAA ACTCAGAGTT TCGCAATGCG 
TGTATCTGCG CCCCGCTTTA TCCTGGCCGA CTTGATGCAG CCAAAATGCG CTCTTTATTG 
ACCGAGTTGG AAGGGGCGTT ACGACTATCC GTCAAGAGTG AGGAGTGTGG GCTTCCAGAT 
CTGACAAACC TCGATATTGA TCACATAATG CCACGTAGCT GGCACACCAA CTGGCCTCTA 
AATGACGGCA GTTCCGCAGC GAACATTGAT GAGGCGGATA TCGAAATTAT CCTGCGTTCT 
GGAGGCTCAC TGACCCCCAA GCAGCAATTG ATTCGCGAAC GGCACGATAC CGTTCCAACC 
TTGGGCAACC TGACGCTACT GAATTTGAGC GTGAACCGGT CAGCGCAACA CTGCGACTTT 
CTGTTGAAGC GGGACAAGCT GATTGCCAAC ACGAGTCTTC GTCTCAACAT CCCATTGATA 
GCGAAACTGA AGTGGAACGA GCTAGAAATT GCAGCGCGAG GCGAATTGTT TGCAGGTGTG 
GCTCTGAGAG TTTGGCCAAA GGGAGAATGA 

 

Protein sequence

MKSETLTVRQ IFQDRRQYCV PFYQRAYVWT QRNQWTGLWQ DIQEKANARV SGMNITPHFL 
GAVVLEPQVK HGLMGVDTLH IIDGQQRLTT LQYILASLLL ALRETGMQVF EPSVIACMQN 
TNEETMRNPQ MERFKLWPTF RDRPHFEKSL AIQQLEDFRK EFSAHFTQHG TLRKHYDHPP 
SLAALWFFTA EFIEWIRSGV DQELSYAEAL IMAVLQDLKL VSISLEAEDD AQVIFETLNG 
RGAELHATDL IRNYIFMRAD HDGVDAAALY NSQWLPFESD YWSTKQRRGR INKPRLEWLI 
HSTLQAEMGS EIDLSRLYNE YRRYAAASPL PKTAGRQLLT LNQYAGHYRD LISMSGSSPV 
ARLGRRIAAY DVTTLHPLTL LISVAEVGDA EKTQMFNDLV SYIVRRAICG LTPKNYNNVF 
LSALRHLTKS GISSEELRSY LGTLKGDASR WPENSEFRNA CICAPLYPGR LDAAKMRSLL 
TELEGALRLS VKSEECGLPD LTNLDIDHIM PRSWHTNWPL NDGSSAANID EADIEIILRS 
GGSLTPKQQL IRERHDTVPT LGNLTLLNLS VNRSAQHCDF LLKRDKLIAN TSLRLNIPLI 
AKLKWNELEI AARGELFAGV ALRVWPKGE