| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1632 |
|---|
| Symbol | |
|---|
| ID | 1183269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1786655 |
|---|
| End bp | 1788403 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637393004 |
|---|
| Product | acetyltransferase, GNAT family |
|---|
| Protein accession | NP_791457 |
|---|
| Protein GI | 28868838 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03103] GNAT-family acetyltransferase TIGR03103 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA ACGCGACGAC TTATAGCCAA CGCCTGTTGC GCGGACAGTC GCCCTCGTAT
GAACGCCTGC AAGCGCGCCT AGCCGAAGAT GGCAGCCAGA TCGATGCAGA GCCGTTGGCC
CTGCATTGTG GCTGGGGTCG CCTGCTGATC GGTCATACGT ATCCTGACCC GGCAGCGCTG
GCGCAGGACC TGCTTAACGA GAAAGCCGGC GAACGCGACA TTGCCTTGTA TGTGGCCGCG
CCACAGCAGG TGCTGGCGCA AGCGCCGCAA CAGTTGTTTC TCGACCCGTC GGACACGTTG
CGTCTGTGGT TCAGCGACTA CCGTCCGGCG CAGCGCGTGT TCCGCGGTTA TCGTATCCGC
CGGGCGCACA ACGAAACCGA CTGGCAGGCC ATCAATAACC TGTACCTGGC ACGCGGCATG
TTGCCCATCG ACCCTGCCCT GCTCACCCCG CGTCATCAGG GCGGCCCGGT GTACTGGGTG
GCCGAGGACG AAGGCAGCAA CACGATCATC GGCAGTGTCA TGGGCCTGAA TCATCAAAAG
GCGTTCAACG ACCCGGAAAA AGGCAGCAGC CTGTGGTGCC TGGCGGTTGA CCCGCAGTGC
ACACGCCCAG GTGTGGGTGA GGTGTTGGTT CGCCATCTGA TCGAGCATTT CATGAGCCGT
GGCCTGAGCT ACCTTGATCT GTCGGTGCTG CATGACAACG AGCAGGCCAA GGCGCTGTAC
GCCAAGCTGA ATTTTCGCAA TCTGCCGACC TTCGCCATCA AACGCAAAAA CGGCATCAAC
GAATCGCTGT TTCTAGGCCC TGGCCCGCAG GCGGACTTCA ATCCGTATGC GCGGATCATC
GTCGAAGAGG CGCATCGTCG CGGCATTGAC GTGCAGGTAG ACGATGCCGA TGCCGGGCTG
TTCACACTCT GCTATGGCGG CCGTCGTATT CGCTGCCGGG AATCGTTGAG CGACCTGACC
AGCGCGGTCA GCATGACCCT GTGCCAGGAC AAGAGCCTGA CCCATCGCGC CCTGAAAGCG
GCCGGGCTGC GCTTGCCAGC GCAGCAGCGG GCGGGCGATG AGGCCGACAA TCGTGCGTTT
CTCGAAGAGC ACAAGCAAGT CGTGGTCAAG CCGCTCGATG GCGAGCAAGG CCAGGGCGTC
GCGGTTGACC TGCGCACGCT TGAAGACGTG CAGAGCGCCA TCGAACAGGC CCGTCAGTTC
GACAGCCGGG TGATCCTGGA AAGCTTTCAC GAGGGCCTGG ACCTGCGCAT CGTGGTGATC
GGCTTTCAGG TGGTGGCCGC GGCGATACGC CGCCCTGCAG AAATCATTGG CGATGGCCGT
CACACCATCA AGCAGTTGAT CGAAGCGCAA AGCCGTCGCC GTGCTGCCGC GACCGATGGT
GAAAGCCGTA TCCCGATGGA CCAGGAAACC GAGCGCACAG TGCGTGAGGC CGGTTTTGAC
TATGCCGATA TCTTGCCGAT GGATCAGCGT TTGGCCGTAC GCCGCGCTGC CAACCTGCAC
ACCGGAGGCT GTCTGGAAGA TGTCACGGCC ATCTTGCACC CGGTACTCAG TGACGCAGCG
GTACGTGCTG CCCGAGCGCT GGATATTCCG GTGGTCGGCC TGGACCTGAT GGTGCCCGCT
GCCGATCAGC CCGACTATGT GTTCATTGAA GCCAACGAAC GCGTCGGGCT GGCCAACCAT
GAACCGCAAC CTACTGCCGA ACGTTTCGTC GATCTGCTGT TTCCGCACAG CCTGCCTGTG
CATATCTGA
|
|---|
| Protein sequence | MKQNATTYSQ RLLRGQSPSY ERLQARLAED GSQIDAEPLA LHCGWGRLLI GHTYPDPAAL
AQDLLNEKAG ERDIALYVAA PQQVLAQAPQ QLFLDPSDTL RLWFSDYRPA QRVFRGYRIR
RAHNETDWQA INNLYLARGM LPIDPALLTP RHQGGPVYWV AEDEGSNTII GSVMGLNHQK
AFNDPEKGSS LWCLAVDPQC TRPGVGEVLV RHLIEHFMSR GLSYLDLSVL HDNEQAKALY
AKLNFRNLPT FAIKRKNGIN ESLFLGPGPQ ADFNPYARII VEEAHRRGID VQVDDADAGL
FTLCYGGRRI RCRESLSDLT SAVSMTLCQD KSLTHRALKA AGLRLPAQQR AGDEADNRAF
LEEHKQVVVK PLDGEQGQGV AVDLRTLEDV QSAIEQARQF DSRVILESFH EGLDLRIVVI
GFQVVAAAIR RPAEIIGDGR HTIKQLIEAQ SRRRAAATDG ESRIPMDQET ERTVREAGFD
YADILPMDQR LAVRRAANLH TGGCLEDVTA ILHPVLSDAA VRAARALDIP VVGLDLMVPA
ADQPDYVFIE ANERVGLANH EPQPTAERFV DLLFPHSLPV HI
|
|---|
| |