Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1606 |
Symbol | |
ID | 1183243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1760910 |
End bp | 1762121 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392978 |
Product | sensor histidine kinase |
Protein accession | NP_791431 |
Protein GI | 28868812 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCAAT CCATTTCAAA TGATGTAGCC ACAATCAGCC GGATCAGCGC GGTGCCGGCG ATTCTGCAAG TCATTACCGA ATCCACCGGC CTGGGTTTCG CGGCAGTGGC GCGCGTCACC GAAGACTCCT GGACGGCCTG CGCGGTCCTG GACAACCTCG GTTTTGGTTT GAAGCCTGGT GGTGAGCTGG AGCTGATCAG TACGATCTGC CACGAGATAC GCGCCTCTCA TAAGCCGGTG GTGATCGATC ATGTCGCTGA GGACGAGCTG TTCTGCGCGC ATCACACACC GCGTCGCTAC AACTTCCAGA GCTACATATC GATACCCATT TTTCTCACCG ATGGCAGTTT TTTCGGCACC ATCTGTGCGC TCGATCCCAA GCCCGCCAAG CTGACCGGCA CGCCTATCGA GGCGATGATG GTGTCGTTCG CGCGCCTTCT GGCGCTGCAG ATCGAGGCCG AAGAGAACAT GCAGCGTGTG CAGGCCGATC TTCTGGCCGA GCGCGAAGTG GCTGAGCTGC GTGATCAATT CATCGCCGTT CTGGGGCATG ACCTGCGCAA TCCGCTGTTT GCCATCAATG CGAGTGCCGA GCTGTTACTG CGCCGCCCGC TGGATGACAA GACGTTGCAG GTCGCTCAGC ACATCCTGAC GTCGGGCCAG CGTGCCTCGC AACTGGTCGA TGACGTGCTT GATTTCGCCC GTGGTCGTAT GGGGCATGGC ATTCCGTTGA GCATTCACGA CGCCCATGGC CTGGACAAAA CGCTTGAGCA TGTGGTGTCT GAGATACAGC GTGTGCACCC CTCCCGACTG ATTCGTTCGA ATATCGGGGC GCTGGAGCTC ATTCGCTGTG ACCATGAGCG GATCGCGCAA CTGCTGTCCA ATCTGGTCTC CAACGCGATC ACCCACGGCG CCTCTGACAG CTCGGTCGAG GTGGCCGCCG GGGTGCTCGG CGACAGGTTT GTGCTCAGCG TTGCCAATCA GGGTGAGCCG ATCCCCGAGT CAATGCGTTC GCAGCTGTTT CTGCCGTACT CACGGCCGAT CACTAACGAG CCGCAGGCCG GGCTGGGGCT GGGTTTGTAT ATCGCCAGCG AGATAGCGCA GGCTCACGGC GGCACGCTTG ACGTGTGCTC GACGCAGGAA GGTGGCACCG TATTCACCTT CAGCATGCCG CTGAAGCCGA GCAGCACCTG CCCGCACGCC GAAGACCTGT GA
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Protein sequence | MRQSISNDVA TISRISAVPA ILQVITESTG LGFAAVARVT EDSWTACAVL DNLGFGLKPG GELELISTIC HEIRASHKPV VIDHVAEDEL FCAHHTPRRY NFQSYISIPI FLTDGSFFGT ICALDPKPAK LTGTPIEAMM VSFARLLALQ IEAEENMQRV QADLLAEREV AELRDQFIAV LGHDLRNPLF AINASAELLL RRPLDDKTLQ VAQHILTSGQ RASQLVDDVL DFARGRMGHG IPLSIHDAHG LDKTLEHVVS EIQRVHPSRL IRSNIGALEL IRCDHERIAQ LLSNLVSNAI THGASDSSVE VAAGVLGDRF VLSVANQGEP IPESMRSQLF LPYSRPITNE PQAGLGLGLY IASEIAQAHG GTLDVCSTQE GGTVFTFSMP LKPSSTCPHA EDL
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