Gene PSPTO_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1606 
Symbol 
ID1183243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1760910 
End bp1762121 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content60% 
IMG OID637392978 
Productsensor histidine kinase 
Protein accessionNP_791431 
Protein GI28868812 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAAT CCATTTCAAA TGATGTAGCC ACAATCAGCC GGATCAGCGC GGTGCCGGCG 
ATTCTGCAAG TCATTACCGA ATCCACCGGC CTGGGTTTCG CGGCAGTGGC GCGCGTCACC
GAAGACTCCT GGACGGCCTG CGCGGTCCTG GACAACCTCG GTTTTGGTTT GAAGCCTGGT
GGTGAGCTGG AGCTGATCAG TACGATCTGC CACGAGATAC GCGCCTCTCA TAAGCCGGTG
GTGATCGATC ATGTCGCTGA GGACGAGCTG TTCTGCGCGC ATCACACACC GCGTCGCTAC
AACTTCCAGA GCTACATATC GATACCCATT TTTCTCACCG ATGGCAGTTT TTTCGGCACC
ATCTGTGCGC TCGATCCCAA GCCCGCCAAG CTGACCGGCA CGCCTATCGA GGCGATGATG
GTGTCGTTCG CGCGCCTTCT GGCGCTGCAG ATCGAGGCCG AAGAGAACAT GCAGCGTGTG
CAGGCCGATC TTCTGGCCGA GCGCGAAGTG GCTGAGCTGC GTGATCAATT CATCGCCGTT
CTGGGGCATG ACCTGCGCAA TCCGCTGTTT GCCATCAATG CGAGTGCCGA GCTGTTACTG
CGCCGCCCGC TGGATGACAA GACGTTGCAG GTCGCTCAGC ACATCCTGAC GTCGGGCCAG
CGTGCCTCGC AACTGGTCGA TGACGTGCTT GATTTCGCCC GTGGTCGTAT GGGGCATGGC
ATTCCGTTGA GCATTCACGA CGCCCATGGC CTGGACAAAA CGCTTGAGCA TGTGGTGTCT
GAGATACAGC GTGTGCACCC CTCCCGACTG ATTCGTTCGA ATATCGGGGC GCTGGAGCTC
ATTCGCTGTG ACCATGAGCG GATCGCGCAA CTGCTGTCCA ATCTGGTCTC CAACGCGATC
ACCCACGGCG CCTCTGACAG CTCGGTCGAG GTGGCCGCCG GGGTGCTCGG CGACAGGTTT
GTGCTCAGCG TTGCCAATCA GGGTGAGCCG ATCCCCGAGT CAATGCGTTC GCAGCTGTTT
CTGCCGTACT CACGGCCGAT CACTAACGAG CCGCAGGCCG GGCTGGGGCT GGGTTTGTAT
ATCGCCAGCG AGATAGCGCA GGCTCACGGC GGCACGCTTG ACGTGTGCTC GACGCAGGAA
GGTGGCACCG TATTCACCTT CAGCATGCCG CTGAAGCCGA GCAGCACCTG CCCGCACGCC
GAAGACCTGT GA
 
Protein sequence
MRQSISNDVA TISRISAVPA ILQVITESTG LGFAAVARVT EDSWTACAVL DNLGFGLKPG 
GELELISTIC HEIRASHKPV VIDHVAEDEL FCAHHTPRRY NFQSYISIPI FLTDGSFFGT
ICALDPKPAK LTGTPIEAMM VSFARLLALQ IEAEENMQRV QADLLAEREV AELRDQFIAV
LGHDLRNPLF AINASAELLL RRPLDDKTLQ VAQHILTSGQ RASQLVDDVL DFARGRMGHG
IPLSIHDAHG LDKTLEHVVS EIQRVHPSRL IRSNIGALEL IRCDHERIAQ LLSNLVSNAI
THGASDSSVE VAAGVLGDRF VLSVANQGEP IPESMRSQLF LPYSRPITNE PQAGLGLGLY
IASEIAQAHG GTLDVCSTQE GGTVFTFSMP LKPSSTCPHA EDL