Gene PSPTO_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1597 
Symbol 
ID1183234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1754264 
End bp1755235 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID637392969 
Productribonuclease BN, putative 
Protein accessionNP_791422 
Protein GI28868803 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.294731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTCC CCCATTTGCG TCAACTGCGA GTCAGCAAAG TGCTGTTGCG CACCGTCAAT 
GAGTTTCTTG ACGACGAGAT GTCCACCTAC GCTTCGGCAC TGGCTTACCA GATGCTGTTT
TCGTTGTTCC CGTTTCTGCT GTTTCTGATC GCCTTGATCG GTTTTCTGCA TCTGCCTGAC
TTTTTCTCGT GGCTGCGCCT GCAATCCGAG TTGGTCCTGC CCCCGCAGGC CTTGGAGCAG
GTCAACCCGG TCATTGACCA GTTGCAGCAA TCCAAGGGCG GCTTGCTGTC GATCGGTATC
GTGATCGCTT TGTGGACCGC TTCGGCGGGT GTGCGCCTGA TGATGAGCGC CATGAACGCT
GCCTATGATG TGGTTGAAGG ACGCCCTATC TGGAAACGCT TTCCGCTGTC GATTCTCTAC
ACCGTCGGTA TTGCCGGCAT GTTGCTCGCA GCAGCGGCAT TCATGGTGCT CGGCCCGCAG
GTGATGAACT GGATCGCGGC GCAGATCGGC ATGGAAGACT TTATTGTCAC GTTGTGGACC
ATCCTGCGCT GGCCGGCAAT CATCCTGCTA TTGATGGTCG CTGTGGCGTT GATCTACTAC
GTGATGCCTG ACGTGAAACA AGAGTTTCGT TTCATCACGC CCGGCTCGGT GCTGGCCGTG
GTGGTGTGGA TTGTCGCCTC GCTGGCATTC GGCTTCTACG TCAAGACGTT TGCCGACTAC
AACGCCATGT ACGGCAGCAT TGGTGCGATC ATTGTGCTGT TGCTGTACTT TTATATTTCC
GCTGCCGTGC TGTTGCTGGG GGCGGAAATG AATGCGGTGA TCGAGCACAT GTCCGCAGAA
GGCAAGGAAG CAGGCGAGAA AGAACCGGGC GACGGCCTGG GTGACGAGCA GAACGAAGCG
GGCGGCAAGC AGCACGTTTC CGGCCTGGGC CGCGATCATT CAGTGCCATT GCCGAAGGCT
GACGAAACCT GA
 
Protein sequence
MIFPHLRQLR VSKVLLRTVN EFLDDEMSTY ASALAYQMLF SLFPFLLFLI ALIGFLHLPD 
FFSWLRLQSE LVLPPQALEQ VNPVIDQLQQ SKGGLLSIGI VIALWTASAG VRLMMSAMNA
AYDVVEGRPI WKRFPLSILY TVGIAGMLLA AAAFMVLGPQ VMNWIAAQIG MEDFIVTLWT
ILRWPAIILL LMVAVALIYY VMPDVKQEFR FITPGSVLAV VVWIVASLAF GFYVKTFADY
NAMYGSIGAI IVLLLYFYIS AAVLLLGAEM NAVIEHMSAE GKEAGEKEPG DGLGDEQNEA
GGKQHVSGLG RDHSVPLPKA DET