| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1579 |
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| Symbol | |
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| ID | 1183216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1739236 |
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| End bp | 1740444 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392951 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_791404 |
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| Protein GI | 28868785 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAT TTGAATCTAC CCCGCAGCAG ACGACGACGG CTCACCCGCC TGCCTGGGGC
GCCGTGTTTT CCATGGCCCT GTGTGTGGTG GTGCTGATTG CGTCGGAGTT CATGCCGGTC
AGCCTGCTGA CACCGATCGC GCAGGATCTC GGCATCAGCC AGGGCCAGGC CGGGCAGGCG
ATTTCGATTT CCGGCTTTTT TGCCGTATTG ACCAGTCTGC TGAACACCTC GTTGACCGGG
CATCTTGACC GCAAGCATGT CCTGCTGGGC TTCAGCCTGT TGTTGCTGGT GTCCGGGGTG
ATCGTCACGC TGGCGTCCAG CGGCTGGGTA TTCATGACCG GCCGTGCATT GCTCGGGGTC
GCCATCGGCG GCTTCTGGTC GATGTCGACA GCGACCGTGA TGAAACTGGT GCCCAAAGAA
TCCGTCGCCA AGGGCCTGGC GCTGATCAAC GGCGGTAACG CCCTGGCGGC CACCGTGGCT
GCGCCGCTGG GCAGTTTCAT GGGCCAGTAC ATTGGCTGGC GTGGCGCGTT TTTTCTGGTT
GTCCCGCTCG CCGCACTGGC TTTCGCCTGG CAGTGGTTGA GCCTTCCGGC GATGAACAAC
GCGCCGAACA GTCGGGCGCG TAACCCGTTT CAGCTGCTGC GCACTCCACA GATCGCCATT
GGCATGACCG CCATCATGCT GCTGTTCATG GGCCAGTTCG CCGTCTTCAC CTACTTGCGC
CCGTTTCTGG AAGACGTCAC TGGCGTTAGC GTCACCACCC TGTCGCTGAT GCTGCTGTTG
CTGGGTGCCA GCGGGTTGCT TGGGACTTAT CTGATTGGCG GGCTGCTGCA AAAACGCATT
TATGCCTGCC TGATCGCGAT TCCGCTGGTG ATGGCCGTTC TTGCCTTGGC ACTCACCGGC
CTGGGCCACT CGCCGCTGGC CGTCGCCGCC GTGCTTGCCG CCTGGGGGCT GATCGCCACG
CCAGCACCTG TTGCCTGGGG CCTGTGGTTG AGCAGAGCAC TGCCCGACGA TGCCGAGGCA
GGCGGCGGGC TAATGGTCGC AACCATTCAG ATGGCAATCA CGGCGGGTGC GGGCATCGGC
GGTGCGCTGT TCGACAACCT CGGCTGGTGG AGCCCGTTCG CATTCGGTGG CGTGCTGCTG
GCGGCTTCGG CCGCGCTTGC CGGGGCGGCA CGACTTAACG CTCGCACTGA TCAACAACGC
CACACGTAA
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| Protein sequence | MNAFESTPQQ TTTAHPPAWG AVFSMALCVV VLIASEFMPV SLLTPIAQDL GISQGQAGQA
ISISGFFAVL TSLLNTSLTG HLDRKHVLLG FSLLLLVSGV IVTLASSGWV FMTGRALLGV
AIGGFWSMST ATVMKLVPKE SVAKGLALIN GGNALAATVA APLGSFMGQY IGWRGAFFLV
VPLAALAFAW QWLSLPAMNN APNSRARNPF QLLRTPQIAI GMTAIMLLFM GQFAVFTYLR
PFLEDVTGVS VTTLSLMLLL LGASGLLGTY LIGGLLQKRI YACLIAIPLV MAVLALALTG
LGHSPLAVAA VLAAWGLIAT PAPVAWGLWL SRALPDDAEA GGGLMVATIQ MAITAGAGIG
GALFDNLGWW SPFAFGGVLL AASAALAGAA RLNARTDQQR HT
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