Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1534 |
Symbol | rpsB |
ID | 1183171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1693557 |
End bp | 1694300 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637392906 |
Product | ribosomal protein S2 |
Protein accession | NP_791359 |
Protein GI | 28868740 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAG TCAATATGCG CGATATGCTG AAGGCCGGTG TGCACTTCGG TCACCAAACC CGTTACTGGA ACCCGAAAAT GGGTAAATAC ATTTTCGGCG CGCGTAACAA GATTCACATC ATCAACCTTG AAAAAACCCT GCCTATGTTC AACGAAGCTC TGACTTTCGT TGAGCGCCTG GCGTCGGGCA AAAACAAGAT TCTGTTCGTC GGCACCAAGC GCTCCGCTGG CAAGATCGTT GCTGAAGAAG CAGCACGTTG CGGTTCGCCG TACGTCGATC ATCGCTGGTT GGGCGGCATG CTGACCAACT TCAAGACCAT CCGTCAGTCG ATCAAACGTC TGCGCGAGCT GGAAGTACAA GCTGAAGACG GTACTTTCGC CAAGCTGACC AAGAAAGAAG CCCTGATGCG CACCCGTGAT CTGGAAAAAC TGGATCGCAG CCTGGGTGGT ATCAAGGACA TGGGCGGTCT GCCAGACGCA CTGTTCGTTA TCGACGTTGA TCACGAGCGC ATCGCGATCA CCGAAGCCAA CAAGCTGGGC ATCCCGGTTA TCGGCGTTGT CGATACCAAC AGCAGCCCGG AAGGCGTTGA CTACATCATC CCGGGCAACG ATGACGCAAT CCGCGCCATC CAGCTGTACA TGGGCTCGAT GGCTGACGCT GTTATCCGTG GTCGTAACAA TGTTGCTGGC GGCACCGACG TATTCGTCGA AGAAGCTCCA GCTGCAGCTG CTGTAGAAGG CTGA
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Protein sequence | MSQVNMRDML KAGVHFGHQT RYWNPKMGKY IFGARNKIHI INLEKTLPMF NEALTFVERL ASGKNKILFV GTKRSAGKIV AEEAARCGSP YVDHRWLGGM LTNFKTIRQS IKRLRELEVQ AEDGTFAKLT KKEALMRTRD LEKLDRSLGG IKDMGGLPDA LFVIDVDHER IAITEANKLG IPVIGVVDTN SSPEGVDYII PGNDDAIRAI QLYMGSMADA VIRGRNNVAG GTDVFVEEAP AAAAVEG
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