Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1484 |
Symbol | |
ID | 1183121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1632745 |
End bp | 1633371 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392857 |
Product | DNA-binding response regulator, LuxR family |
Protein accession | NP_791310 |
Protein GI | 28868691 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGACG ACCACCCTAT TTTCCTGATT GGCCTGCGCG CGGTACTGGA ACAGGACGAC CTGGCGCACG TGGTTGCCGA AGCCGGCAAT CCGGACGCAC TGCTGCAGGC ACTCGCAAGC CTCGCCTGCG ATGTGCTGGT GACTGACTTC ATGATGCCCG TCGAGCGTCA GAATGACGGC CTGCGCCTGC TGCAGCGTGT GCGCCGGGAT TTTCCGGTAC TGCCGGTGAT TGTCGTGACG ACGTTGAGCA ATGCCGGGCT TTTTCAGTCC ATGCTCGACC TCGGTGTGCG TGGCCTGTTG AGCAAGGCCA GCCTGGCCGG AGAACTGCCT GCTGCGGTCA GGGGCGCGTT GCGCGGGGAA GTTTTTGTCG CCGATTCCGT GCGTCGGGTT TTGCGCGAGG CACAGCAATA CGGGCCTGAT GCGCTGCTGG CGGCCGAACG CTTGTCCCCA AGAGAGCTGG AAGTGTTACG CCTGTTCTCG GCAGGCCATA CGGTTGGCCA GATCGCGGCG CAACTCAATC GCAGCAAACA GACTGTCAGC GCGCAGAAAG TCGGTGCCAT GCGCAAGCTC GGCCTGGCCA ACGACGCCGC GCTGTTTATC TATTTGCAGG AAAGCGGCAT GTCCTGA
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Protein sequence | MADDHPIFLI GLRAVLEQDD LAHVVAEAGN PDALLQALAS LACDVLVTDF MMPVERQNDG LRLLQRVRRD FPVLPVIVVT TLSNAGLFQS MLDLGVRGLL SKASLAGELP AAVRGALRGE VFVADSVRRV LREAQQYGPD ALLAAERLSP RELEVLRLFS AGHTVGQIAA QLNRSKQTVS AQKVGAMRKL GLANDAALFI YLQESGMS
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