Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1462 |
Symbol | |
ID | 1183099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1609228 |
End bp | 1609779 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392835 |
Product | mutT/nudix family protein |
Protein accession | NP_791288 |
Protein GI | 28868669 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTT GCAGCCAGTG TGGCAACACC GTTATCCAGC GTATCCCCGA AGGCGACAGC CGTCTGCGGT ACGTCTGCGA GCATTGCCAG ACCATTCATT ATCAGAACCC CAATATTGTT GCGGGCTGCC TGGTGACGCT GGGCGACAAG GTTCTGCTGT GCCGCCGGGC CATCGAACCA CGCCTGGGTT TCTGGACGTT GCCGGCCGGC TTCATGGAAA ACGGCGAAAC CATCGAACAG GCCGCGCGCC GCGAAACCCA GGAAGAAGCC TGCGCCACGC TGACTGATCT GCACCTGTAC ACGCTGATCG ACGTGCCGCA CATCAATCAG GTGCACGTGT TTTATCGGGC AGAAATGGCC ACCGAAGCGT TCGCCGCAGG TATCGAGAGC CTTGAAGTGC AGTTATTCGA CGAAGCCGAC ATTCCGTGGG CAGACCTGGC TTTCATGACG GTCGGGCGTA CCCTAGAATA CTTCTTCGCG GATCGGCGTC GGCAGGTCTA CCCGGTTCAT ACCAGCGCCC TTCCTCCGTC AAGCCCACTG CTGGACACTT GA
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Protein sequence | MKFCSQCGNT VIQRIPEGDS RLRYVCEHCQ TIHYQNPNIV AGCLVTLGDK VLLCRRAIEP RLGFWTLPAG FMENGETIEQ AARRETQEEA CATLTDLHLY TLIDVPHINQ VHVFYRAEMA TEAFAAGIES LEVQLFDEAD IPWADLAFMT VGRTLEYFFA DRRRQVYPVH TSALPPSSPL LDT
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