Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1444 |
Symbol | leuA |
ID | 1183081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1582912 |
End bp | 1584669 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392817 |
Product | 2-isopropylmalate synthase |
Protein accession | NP_791270 |
Protein GI | 162533076 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.413521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTCGCC CCTGTGTTCG CTACCCCCAT GTTTTTAGAA CGGCAGGCCG CCTTTATCCG GCCCCTTCAC TACAAAAGGA TTTCCAGATG ACCATGCTCA ACGATCCATC GAAGAAGTAC CGCGCGTTCC CGACCATTGA CTTGCCTGAC CGCACCTGGC CATCGAAAAC CATTGATGCG GCGCCGATCT GGTGCAGTTC CGACCTGCGC GACGGCAATC AGTCGCTGAT CGAGCCGATG GACTCAGTCA AAAAGCTGCG TTTCTGGAAA ACCCTGGTCA GCGTCGGCGT CAAGGAAATC GAGGCGTCGT TCCCGGCGGC TTCGCAAACT GACTTCGATT TCGTTCGTAC TCTGATCGAA GACGGCCACA TCCCGGACGA CACCACCATT CAGGTGCTGA CCCAGGCGCG TGAAGACCTG ATCGCTCGTA CTTTTGAATC GCTGCGTGGC GCCAAGAAGG CCATCGTTCA CCTGTATAAC GCTACCTGCC CATCGTTTCG CCGTATTGTC TTCAATCAGG ACAAAGCTGG CGTGAAGGAA ATCGCGGTCA ACGCTGCCAA GCTGTTCGTG AAATACGCGG CGCAACAGCC AGAAACCCAG TGGACGTTCG AGTACTCGCC GGAAACCTTC AGTGCCACCG AGCTGGAGTT CGCCAAGGAA GTCTGCGACG CGGTCATCGA AGTGTGGAAC CCGACGCCCG AGAACAAGGT GATCCTGAAC CTGCCGGCCA CCGTTGAAGT CGCTACACCC AATATCTATG CGGACCAGAT TGAATGGTTC GGCCGCCACA TCACTCGCCG CGACAGCGTG CTGATCAGCC TGCACACCCA TAACGACCGT GGCACTGGCG TGGCCGCTAC CGAACTTGGC CTGATGGCGG GCGCGGACCG GGTCGAAGGC TGCCTGTTCG GCAACGGCGA GCGTACCGGC AACGTAGATC TGGTCACTGT CGCACTGAAC CTTTACACCC AAGGCATCAA CCCTGAACTG GACTTTTCGG ACATCGACGG CGTGCGCAAG GTCGTCGAGG AGTGCAACCA GATTCCGGTT CACCCTCGTC ACCCGTACGT TGGCGACCTG GTCCACACCG CGTTCTCCGG CTCGCACCAG GACGCCATCC GCAAGGGCTT CACGCAGCAG AAGGAAGGCG AATTGTGGGA AGTGCCTTAT CTGCCTATCG ACCCGGCTGA TATCGGTCGC AGCTACGAAG CCGTGATTCG CGTCAACAGC CAGTCCGGCA AAGGCGGCAT CGCCTACCTG CTGGAGCAGG AATACGGCAT TTCCCTGCCA CGTCGCATGC AAATCGAGTT CAGCCAGGTG GTTCAGGGTG AAACCGACCG ACTGGGCCTG GAAATGACCG CCGAACAGAT CCACGCGCTG CTGCGCCGTG AATACCTGCA GGCCAACACG CCTTATGCGT TGATCAGCCA TAGGTTGCAG GAAGAGAACG GTAACAGCGC GGTAGATGCC GAAGTGCACG TGGATGGCGA AACGCAGCAT TGGCGCGGCA AGGGCAAAGG AGCTCTGGAA GCACTGGTGG CCGGTCTGCC GGTTGCCGTC GAAATCATGG ACTATAACGA GCATGCCATC GGCTCGGGCA CCACGGCCAA GGCCGCTGCT TATATTGAGC TGCGTGTGAA TGGCGACCGT GCCGTGCACG GCGTGGGTAT TGATGAAAAC ATCACCACGG CCAGCTTCCG CGCCCTGTTT AGCGCATTGA ACCGTTCGCT GAGCCAGGCC CAGGCCAAAG CGGCCTGA
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Protein sequence | MPRPCVRYPH VFRTAGRLYP APSLQKDFQM TMLNDPSKKY RAFPTIDLPD RTWPSKTIDA APIWCSSDLR DGNQSLIEPM DSVKKLRFWK TLVSVGVKEI EASFPAASQT DFDFVRTLIE DGHIPDDTTI QVLTQAREDL IARTFESLRG AKKAIVHLYN ATCPSFRRIV FNQDKAGVKE IAVNAAKLFV KYAAQQPETQ WTFEYSPETF SATELEFAKE VCDAVIEVWN PTPENKVILN LPATVEVATP NIYADQIEWF GRHITRRDSV LISLHTHNDR GTGVAATELG LMAGADRVEG CLFGNGERTG NVDLVTVALN LYTQGINPEL DFSDIDGVRK VVEECNQIPV HPRHPYVGDL VHTAFSGSHQ DAIRKGFTQQ KEGELWEVPY LPIDPADIGR SYEAVIRVNS QSGKGGIAYL LEQEYGISLP RRMQIEFSQV VQGETDRLGL EMTAEQIHAL LRREYLQANT PYALISHRLQ EENGNSAVDA EVHVDGETQH WRGKGKGALE ALVAGLPVAV EIMDYNEHAI GSGTTAKAAA YIELRVNGDR AVHGVGIDEN ITTASFRALF SALNRSLSQA QAKAA
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