Gene PSPTO_1436 details

Gene Information

• Locus tag: PSPTO_1436
• ID: 1183073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1574010
• End bp: 1574651
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637392809
• Product: hypothetical protein
• Protein accession: NP_791262
• Protein GI: 28868643
• COG category: [S] Function unknown
• COG ID: [COG2976] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.279934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCGGGTA CCGAAGATGA AGAGCTGGCG GTAATGAAGG ACTGGTGGCA GCGCAACGGC 
AAACCTTTGC TGACCGGTGG TTTGCTGGCG CTGGTTGTGG TCTTGGGTTG GCAGTTCTGG 
CACAGGTATC AAGCCAGCCA GTCGCAGGGC GCCTCGATGC TTTATCAGCA ACTGCTGGAA 
ACCGCATTGA CGCCAAGTGG TCAGGCCGAC ACCGCGCGTG TTGCCGAGAT ATCCGGCAAA 
CTGAAGAGCG AATTCGGTGG CACTACCTAC GCACAGTTCG GTAGCCTGTT CGTCGCCAAG 
GTGGCGGTCG ATGCCGGCAA GCTGGACGAC GCTGCTGCCG AGCTGAAAGC CGTGGCCGAC 
AAGCCTGCCA ACGACACGCT GGGTGAAATC GCCCGTCAGC GTCTGGCTCG CGTGCTGGCT 
GCGCAGAACA AGACCGATGA CGCGCTGAAA CTGCTCGCCG GCGATGCCGA CAAGGCATTC 
CTCGCCAGTC GTGAAGAACT CAAGGGTGAC CTGCTCGAAC AGCTGGGTCG TACCGACGAG 
GCATATGCTG CATACCAAAA GGCCAAATCT GCGCTGTCCG AAGACGCAGC GGTAGGCGGC 
CTGCAAATGA AGCTCGACGA TCTGGCGAAA GGGGATGCGT GA 

 

Protein sequence

MSGTEDEELA VMKDWWQRNG KPLLTGGLLA LVVVLGWQFW HRYQASQSQG ASMLYQQLLE 
TALTPSGQAD TARVAEISGK LKSEFGGTTY AQFGSLFVAK VAVDAGKLDD AAAELKAVAD 
KPANDTLGEI ARQRLARVLA AQNKTDDALK LLAGDADKAF LASREELKGD LLEQLGRTDE 
AYAAYQKAKS ALSEDAAVGG LQMKLDDLAK GDA