Gene PSPTO_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1422 
Symbol 
ID1183059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1562477 
End bp1562968 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID637392795 
Productrrf2 family protein 
Protein accessionNP_791248 
Protein GI28868629 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTGA CTACTAAAGG CCGATACGCT GTGACAGCCA TGCTTGACCT GGCGTTACAT 
GCGCAGAACG GGCCAGTGTC TCTGGCCGAC ATCTCCGAGC GGCAGGGCAT TTCCCTGTCT 
TATCTCGAAC AGTTGTTCGC CAAACTGCGT CGCGGCAATC TGGTTTCCAG TGTTCGTGGT 
CCGGGCGGCG GTTATCAGCT GTCTCGTGAC ATGAAAGGCA TCCAGGTCGC CCAAGTCGTC 
GACGCGGTCA ATGAATCGGT CGATGCCACG CGTTGTCAGG GGCTGGGTGA TTGCCACGCT 
GGCGATACCT GCCTGACCCA CCACTTGTGG TGCGATCTGA GCCAGCAGAT TCACGAATTT 
CTAAGCGGTA TCAGCTTGGC GGATCTTGTC ACTCGCCGTG AGGTACAAGA AGTCGCTCAG 
CGCCAGGATA TGCGCCGTGG TCATAACCAC ACGTCGCAAC TGGGTAAGAT CGAAACGTCC 
GCCGTCGAAT GA
 
Protein sequence
MRLTTKGRYA VTAMLDLALH AQNGPVSLAD ISERQGISLS YLEQLFAKLR RGNLVSSVRG 
PGGGYQLSRD MKGIQVAQVV DAVNESVDAT RCQGLGDCHA GDTCLTHHLW CDLSQQIHEF 
LSGISLADLV TRREVQEVAQ RQDMRRGHNH TSQLGKIETS AVE