Gene PSPTO_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1352 
Symbol 
ID1182988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1490163 
End bp1490849 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID637392724 
Producttranscriptional regulator, GntR family 
Protein accessionNP_791179 
Protein GI28868560 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTCCC CGTACACCAC CAATGCGCTG GCAGAAGACG TCTATCGTCG GCTCAAGCAA 
GAGATTTTCG ACTTTTACCT GCTGCCCTAC GACCGGTTTA CTGAAACTCA GTTGGCAGAT 
CGCTATCAAG TTTCGCGGAC CCCGGTGCGC GATGCGCTGT ATCGCCTGCA ACGCGAAGGT 
TATCTGGACG TCGAGTTCCG TCGTGGCTGG TCAGTCCGGC CGCTGGATTT CGAGCAGATC 
GACCAACTGT ACGACCTGCG CATCGTGCTC GAATGCGCGG CGATCGAACG CATCTGCGCA 
TCCACCGACG CACACCCGGA ACTCGATGTT CTCCGAGACC ACTGGCTGGT TGCGCCAGAT 
CGCAGGCAAA CCGACATGCA GGTCGTCGCA GACCTCGACG AACAGTTCCA CACGCAACTG 
GTCGCGGCCT CGGGCAATCT GGAAATGGCC CGTGTTCATC AGGAAGTCAC TGAACGTATT 
CGCATTGTGC GCAGGCTGGA CTTCTTCAAA AGCGCCCGCA TTGAACACAC CTACCTTGAG 
CACGCCGCTA TTCTCAACGC ACTTGAGGCG CGTAAACGGG ACGACGCGCT AGTGCTGCTG 
CGCTCGCATG TGGAGATCAG CAAACTGGAA GTGCGCAAAC TGACGATATC CATGCTCACT 
GATGCACGGC GGCGGTATGA GGCGTGA
 
Protein sequence
MNSPYTTNAL AEDVYRRLKQ EIFDFYLLPY DRFTETQLAD RYQVSRTPVR DALYRLQREG 
YLDVEFRRGW SVRPLDFEQI DQLYDLRIVL ECAAIERICA STDAHPELDV LRDHWLVAPD 
RRQTDMQVVA DLDEQFHTQL VAASGNLEMA RVHQEVTERI RIVRRLDFFK SARIEHTYLE 
HAAILNALEA RKRDDALVLL RSHVEISKLE VRKLTISMLT DARRRYEA