| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1330 |
|---|
| Symbol | |
|---|
| ID | 1182966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1460299 |
|---|
| End bp | 1461183 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637392702 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | NP_791157 |
|---|
| Protein GI | 28868538 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.472766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCTT CAGAAAATCA GAGCCTCACG CCCAAACCCT TGGTTTCGAT CGTGGCCCCT
TGCTACAACG CCGAGCGTTT CCTCGACGCT GCGATTCAGA GCATCTTTGC TCAGGACTAC
GAGCATTTCG AGGTCATCAT CGTTGACGAT GGCTCGACCG ACAACAGCAT CGCGATGCTT
GAGTCCTTGC AGGAGCGTTA CCCGTTCCAG CTTTATCGTC AGGCCAACCA AGGGGTCAGC
GCTGCTCTCA ATCATGGTCT TCAGTATGCC AAAGGCGTTT ATCTCTCCAC GCCGGATCTC
GATGACATCA TGCTTGCGTC TTCAGTGCGT ATCCGTGCGG AGTATCTGGA CAAGCACCCC
GAAGTCGGCT GCGTCGGTGC GCTGATCAGC TACATGGACT GTGACGGCAA GAGGATCAAA
TGCCAGTCGC GTGATTACAT AGAGCGGCTG ACATTCGACG ACGTGTTGCG TGGCGCGGTG
GTGGTCGGAG CGCCGGTGGC GCTGTACCGG ATGAAGGCCA TGCGCGACGC GAATGGCTAC
GACCCGACAA TCAAGGTTCA GGATTTCCAG GCGACGTTGA GAATTGCCTA TCTGGGTTAC
CAGATTCATG TCATTCCAGA GGTCGTGACG CGCTATCGCC GTCACCCGAA CAACCTTTCA
CGCAAGTACA AGGTCTTGCT GGACGCCGAC CTGAAAAGCA TCGAGCCCTA CCGCAATCAT
CGCGAATATC AGCGGGGGCG TACGTTGCTC GTCAACAAGG CGCTAAAATA CGCGACGGTC
GCCGATAAAC GCTATGCATG GAGCCTGCTG CGCTCCATCC CGTTGAGATA CGCCAATCTA
ACGACCCTGC GGCGCTGCAA GCGCTTGCTC CTCAGCTATA GGTGA
|
|---|
| Protein sequence | MMPSENQSLT PKPLVSIVAP CYNAERFLDA AIQSIFAQDY EHFEVIIVDD GSTDNSIAML
ESLQERYPFQ LYRQANQGVS AALNHGLQYA KGVYLSTPDL DDIMLASSVR IRAEYLDKHP
EVGCVGALIS YMDCDGKRIK CQSRDYIERL TFDDVLRGAV VVGAPVALYR MKAMRDANGY
DPTIKVQDFQ ATLRIAYLGY QIHVIPEVVT RYRRHPNNLS RKYKVLLDAD LKSIEPYRNH
REYQRGRTLL VNKALKYATV ADKRYAWSLL RSIPLRYANL TTLRRCKRLL LSYR
|
|---|
| |