Gene PSPTO_1326 details

Gene Information

• Locus tag: PSPTO_1326
• Symbol: cyoB
• ID: 1182962
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1456163
• End bp: 1458175
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637392698
• Product: cytochrome o ubiquinol oxidase, subunit I
• Protein accession: NP_791153
• Protein GI: 28868534
• COG category: [C] Energy production and conversion
• COG ID: [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
• TIGRFAM ID: [TIGR02843] cytochrome o ubiquinol oxidase, subunit I

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGGCA AATTAAGTCT GGAAGCGGTG CCGTTCCACG AGCCGATAGT CATGGTGACA 
CTCGCCATGA TTGCGCTCGG CGGCATTGCG GTTGTCGGGT TGATCACCTA TTTCCGCAAG 
TGGACGTACT TGTGGTCTGA ATGGCTGACG TCTGTCGACC ACAAGAAAAT CGGCGTGATG 
TACATCATCG TTGCCATGGT CATGCTGCTG CGCGGCTTTG CCGACGCAAT CATGATGCGT 
ACCCAACTGG CGATGGCCCA GAACGGTGCC GAAGGGTTCC TTCCGCCTGA GCACTATGAC 
CAGATCTTCA CCGCGCACGG TGTGATCATG ATCATCTTCA TGGCGATGCC GTTCTTCACG 
GGCCTGATGA ACATCGTTCT GCCTCTGCAG ATCGGTGCCC GCGACGTGGC GTTCCCGTTC 
CTGAACTCCC TGAGCTTCTG GCTACTGGTT GCAGGCATGC TGCTGATCAA CCTGTCGCTG 
GGCGTCGGTG AATTCGCCAA GACCGGCTGG GTCGCGTATC CGCCTCTCTC CGGGCTGCAA 
TACAGTCCTG GCGTCGGGGT CGACTACTAC ATCTGGGCAC TGCAGTTATC CGGGCTAGGT 
ACGACATTGA CCGGGGTCAA CTTCCTCGTG ACCGTACTGA AGATGCGTAC CCCAGGCATG 
AAACTGATGG ACATGCCGAT CTTCACCTGG ACCTGCACCT GGGCAAACAT CCTGATCGTG 
GCTTCGTTCC CGATCCTGAC CGCTACCCTG GCGCTGCTGA CCCTCGACCG CTATATGGAC 
TTCCACATCT TCACGAACGA AATGGGTGGT AACCCCATGA TGTACGTGAA CCTGTTCTGG 
GCGTGGGGCC ACCCTGAGGT GTATATCCTG ATCCTGCCGG CATTCGGCGT GTTCTCGGAA 
GTCATCTCCA CGTTCTCCGG CAAGCGTCTG TTCGGCCACA AGTCGATGAT CTTCGCCTCC 
GGTGCGATTT GTATCCTTGG CTTCATGGTC TGGTTGCACC ACTTCTTCAC GATGGGTGCC 
GGTGCCAACG TCAACGCCTT CTTCGGCCTG GCGACGATGC TGATTGCCAT CCCGACGGGT 
GTGAAGCTGT TCAACTGGCT GTTCACCATG TATCAGGGTC GTCTGCGCTT CACAGCGCCG 
GTGCTCTGGA CCCTGGGCTT CATGGTCACC TTCTCGATCG GCGGCATGAC CGGCGTTCTG 
TTGGCGATTC CAGGTGCTGA CTTCGTCCTG CACAACAGCC TGTTCGTAAT CGCTCACTTC 
CACAACGTCA TCATCGGCGG TGCGGTCTTC GGTTACATCG CCGGCTTCGC GTTCTGGTTC 
CCTAAAGCGT TCGGTTTCAC CCTGAACGAG AAGTGGGGCA AGGCAGCGTT CTGGTTCTGG 
ATCGTCGGCT TCTTCGTCGC ATTCATGCCG CTGTACGCGC TGGGCTTCCT GGGTATGACC 
CGTCGTCTGA ACGCTACCGA CATGCCAGAG TGGAACATCT ACCTGGACGT CGCGCTGTTC 
GGTGCGGTGC TGATCGCAAT GGGTATCGCT TCGCAGCTGA TCCAGTTGTT CGTCAGTATC 
CGTGACCGCG ACAGCAATCG CGATCTGACC GGTGACCCGT GGAATGGCCA TACCCTGGAA 
TGGTCCACTT CTTCGCCTCC GCCGTTCTAC AACTTTGCCG AACTGCCAAA AGCTGACGAC 
ATCGACCCGT TCACCGATGC CAAGCGTGCT GGCACCGCGT ACAACGTACC GGCTCGCTAC 
TCGGCGATCC ACATGCCTAA CAACACGGCC ACCGGCCTGT ACATGGGCAT GTTGCTGACG 
GTCTTCGGCT TCGCATTCAT CTGGCACATC TGGTGGCTGG TGGGCGTGAG CCTGGTCGCA 
ACCATTGCGG TCTTCGTTGC TCACGCTGTA CGTGACGACC AGGGCTACAT GGTGCCTGCT 
GAAGATGTAG CGCGTATTGA AGGTGAGCAT CACAAGGTCC TGGCGGCCAA CGGTGCATAC 
ACTCCTGTCA AGTCCTCGCT GGAACAGGTT TAA 

 

Protein sequence

MFGKLSLEAV PFHEPIVMVT LAMIALGGIA VVGLITYFRK WTYLWSEWLT SVDHKKIGVM 
YIIVAMVMLL RGFADAIMMR TQLAMAQNGA EGFLPPEHYD QIFTAHGVIM IIFMAMPFFT 
GLMNIVLPLQ IGARDVAFPF LNSLSFWLLV AGMLLINLSL GVGEFAKTGW VAYPPLSGLQ 
YSPGVGVDYY IWALQLSGLG TTLTGVNFLV TVLKMRTPGM KLMDMPIFTW TCTWANILIV 
ASFPILTATL ALLTLDRYMD FHIFTNEMGG NPMMYVNLFW AWGHPEVYIL ILPAFGVFSE 
VISTFSGKRL FGHKSMIFAS GAICILGFMV WLHHFFTMGA GANVNAFFGL ATMLIAIPTG 
VKLFNWLFTM YQGRLRFTAP VLWTLGFMVT FSIGGMTGVL LAIPGADFVL HNSLFVIAHF 
HNVIIGGAVF GYIAGFAFWF PKAFGFTLNE KWGKAAFWFW IVGFFVAFMP LYALGFLGMT 
RRLNATDMPE WNIYLDVALF GAVLIAMGIA SQLIQLFVSI RDRDSNRDLT GDPWNGHTLE 
WSTSSPPPFY NFAELPKADD IDPFTDAKRA GTAYNVPARY SAIHMPNNTA TGLYMGMLLT 
VFGFAFIWHI WWLVGVSLVA TIAVFVAHAV RDDQGYMVPA EDVARIEGEH HKVLAANGAY 
TPVKSSLEQV