| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1286 |
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| Symbol | |
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| ID | 1182922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1414616 |
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| End bp | 1415158 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392660 |
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| Product | RNA polymerase sigma-70 family protein |
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| Protein accession | NP_791115 |
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| Protein GI | 28868496 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATCTCC GGTCGGGCCT CTCTGTGTCG CAGTCGCATT TCAACGATGT CTTTCTGGCC
CAGCGCGCCG TGCTGTTACG CACATTGCAA CGCATGGTCG GCAACCCCAG CACCGCAGAA
GACCTGCTGC ACGAAACCTG GCTGCGAGTC AGCCGTGCGC TGACCGAGCA CCCGGTCGAC
CATCTCGAAC CCTTCGTTTT TCAGACCGCG CTCAACCTTG CGCTGGACCA TCTGCGTGCG
CGACGTATTC ATGCCCGCAC CCTCGTCGAA GACGTCTCGC CGGGCCAACT GGAACGCGTT
GTCGCGCAAC TCGGCAAACC TGAAGATGCC GCCCACGCCA AGCGTCTGCT CGAAAGCCTG
AGCGCCAGCC TGAGCACATT GAGCCCGCGT CAACAAAAAA TTTTCACCCT CAGCCGCCTC
AACGGCTGCA GCTATCTGGA AATCGCCGAG CAGTTGCAAG TTTCGGCCAG TACGGTGCAA
AAGGAATTGA AACTGATCAT GGCGATCTGC ATCGGCGTGG TGTCAAGGCT TGACCCGCCC
TGA
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| Protein sequence | MNLRSGLSVS QSHFNDVFLA QRAVLLRTLQ RMVGNPSTAE DLLHETWLRV SRALTEHPVD
HLEPFVFQTA LNLALDHLRA RRIHARTLVE DVSPGQLERV VAQLGKPEDA AHAKRLLESL
SASLSTLSPR QQKIFTLSRL NGCSYLEIAE QLQVSASTVQ KELKLIMAIC IGVVSRLDPP
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