Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1258 |
Symbol | |
ID | 1182894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1381652 |
End bp | 1382416 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392633 |
Product | amino acid ABC transporter, ATP-binding protein |
Protein accession | NP_791088 |
Protein GI | 28868469 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.13929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG TTATCAATAA GCCCCTGGGC GCTGAAGGCA TGATCCGCAT GGAGGGCGTC CACAAGTGGT ACGGCCAGTT CCATGTGCTC AAGGACATCA ACCTGAATGT GCGCCAGGGC GAACGTATCG TGCTGTGCGG CCCGTCTGGC TCGGGCAAGT CGACCACCAT TCGCTGCCTC AACCGTCTGG AAGAGCACCA GCAGGGCCGT ATCATCGTTG ATGGCACCGA ACTGACTTCC GACCTGAAGC AGATCGAAAC CATCCGCCGT GAAGTCGGCA TGGTGTTTCA GCACTTCAAC CTGTTCCCGC ACCTGACCAT CCTGCAGAAC TGCACGCTGG CACCGATGTG GGTACGCAAG ATGCCGAAGA AGAAAGCCGA AGAAATCGCC ATGCACTACA TTGAGCGTGT GCGTATTCCA GAGCAGGCCC ACAAGTTTCC GGGTCAGCTT TCCGGTGGTC AGCAGCAGCG TGTGGCGATT GCCCGTGCCT TGTGCATGAA GCCGAAAATC ATGCTGTTCG ACGAGCCGAC CTCGGCGCTT GACCCGGAAA TGGTCAAGGA AGTACTCGAC ACCATGGTCG GCCTGGCGGA AGAGGGCATG ACCATGCTCT GCGTGACTCA CGAGATGGGC TTTGCCCGCA CCGTGGCGAA CCGCGTGATC TTCATGGACA AGGGCGAAAT CGTCGAACAG GCTGCACCGA ACGACTTCTT CGACAACCCG CAAAGCGACC GCACCAAGCT GTTTCTCAGT CAGATCATTC ACTGA
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Protein sequence | MSEVINKPLG AEGMIRMEGV HKWYGQFHVL KDINLNVRQG ERIVLCGPSG SGKSTTIRCL NRLEEHQQGR IIVDGTELTS DLKQIETIRR EVGMVFQHFN LFPHLTILQN CTLAPMWVRK MPKKKAEEIA MHYIERVRIP EQAHKFPGQL SGGQQQRVAI ARALCMKPKI MLFDEPTSAL DPEMVKEVLD TMVGLAEEGM TMLCVTHEMG FARTVANRVI FMDKGEIVEQ AAPNDFFDNP QSDRTKLFLS QIIH
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