| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1153 |
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| Symbol | |
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| ID | 1182789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1267728 |
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| End bp | 1268270 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392532 |
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| Product | NAD(P)H-flavin oxidoreductase |
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| Protein accession | NP_790987 |
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| Protein GI | 28868368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
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| TIGRFAM ID | [TIGR03615] pyrimidine utilization flavin reductase protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCCA CAACTGAAGC CCATACCACG TTATCCGCCG ACGTCATCCC GGTCAGCCAG
TTGGCCTTCC GCGACGCGAT GTCCAGCCTT GCAGCGGCGG TCAACGTCAT CACCACCGAC
GGCCAGAGCG GCCGCGCCGG TTTTACCGCA ACCGCGGTGT GCAGCGTGAC CGACCAGCCG
CCAACCCTGC TGGTCTGCAT CAACCGCAGC GCGTCGGTGT ATGAAACCTT CATCGGCAAC
GGCACGCTGT GTGTCAATAC GCTGTGCAAC AGCCAGCAGG CGCTGTCCAA CCTGTTTGGC
GGCAAGACCT CACAAGAGGA GCGCTTTGCC GCTGGCCACT GGGAAAGCGG CGTGACCGGC
GCGCCGCTGC TGGAAGGCGC CAAACTGGCC CTGGACTGCA AAGTGACCCA GTCAGTCAGC
GTCGGCACCC ACGACATCCT TTTTTGCCAA GTGGTGGATA TCAGGCATCA GGATGCGTCA
GACGCGCTGC TGTATTTTGG CCGCCAATAC CATCACCTGC CGGGCGCAGC TGCCGCTGTC
TGA
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| Protein sequence | MQATTEAHTT LSADVIPVSQ LAFRDAMSSL AAAVNVITTD GQSGRAGFTA TAVCSVTDQP
PTLLVCINRS ASVYETFIGN GTLCVNTLCN SQQALSNLFG GKTSQEERFA AGHWESGVTG
APLLEGAKLA LDCKVTQSVS VGTHDILFCQ VVDIRHQDAS DALLYFGRQY HHLPGAAAAV
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