Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1152 |
Symbol | |
ID | 1182788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1266241 |
End bp | 1267428 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392531 |
Product | HDIG domain protein |
Protein accession | NP_790986 |
Protein GI | 28868367 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAAA AAATTCCGGT CGCCGACCTT GCCCTCGGCA TGCACATCCA CAAAATCTGT CGTCGCTGGA CCGATGATCC GTTCTGGATC AGTCTGGTCG AAGTCATGCT TGAAGATGCC GATGTACTCA AGCGCATCCA GCAATCAGGC ACCCGGGAAG TCTGGATTGA AACCGGTAAA AGTCGTGTGC TGGCACTACC ACCTGCAGCC GCTACGACCC AAGGCCAGAA CGACACGGCA CCGGCCAGTC TGGACAAAGA GGTGTTGCGT GCCCGGCTTA TCTGCGGCAG AGCCAGGAAC GCCGTCATGG CCATGTTTAC CGAGGCCCGT ATGGGTCAGG CCATGGATGT CGACAACGTG CAGTTGCTGG TGGAAGAAAT CTCCAATTCG ATTCTGCGCC ATCCCCATGC GCTGATCAGC CTTTCAAGGC TCAAGACCTC CGACGAGTAC ACCTACATGC ACTCGGTGGC GGTCTGCGCG TTGATGGTCG CGCTGGCCAG ACGCATGGGC ATGCCTGACG AACAGGTGCG CGAAGCGGGC GTCGCCGGGC TGATGCACGA TGTGGGAAAA ATGATGATCG CCCCGGATGT GCTCAACAAA CCCGGCCGCC TGACCCATGA AGAATTCGAG ACCATGAAGG CTCACCCGGA ACTGGGCCTG AAGATCCTCA AGGAAAACCA ACCCGTGGCG GCAATGGTTA TGGACGTCTG CCTGCATCAC CACGAGAAGA TCGACGGCTC TGGCTACCCT CATGGCCTGC AGGGCGAGCA GATCAGCATC TTTGCCCGCA TGGGCGCGGT CTGTGACGTG TATGACGCCA TTACCTCCGA CCGGCCTTAC AAAAAAGGCT GGGGGGTGGC GCATTCGATT CGCGAGATGG CGTCGTGGAA AGGTCATTTT GACGAGCGGG TGTTTCAGAG TTTCGTCAAA ACCGTCGGTA TTTATCCGAT CGGCACGCTG GTGCGTCTGG AAAGCGGTCG CCTGGGCGTG GTGGTCGAGC AGAGCGAGGA ATCTTTGCTC AAACCCCGGG TGAAGGTGTT CATGTCGGCG CGTACCGGCA AGACTTTCGC CGCACAGATC ATCGACCTGG GCTGTTCTGC AGACCCGGAC GCGATTGTGA AAATCGAGCT GCCCGGTGAT TGGGGCCTGG CAGAGGTCGA TACGCTGTGG GCCGGCACGC CTGCCTGA
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Protein sequence | MLKKIPVADL ALGMHIHKIC RRWTDDPFWI SLVEVMLEDA DVLKRIQQSG TREVWIETGK SRVLALPPAA ATTQGQNDTA PASLDKEVLR ARLICGRARN AVMAMFTEAR MGQAMDVDNV QLLVEEISNS ILRHPHALIS LSRLKTSDEY TYMHSVAVCA LMVALARRMG MPDEQVREAG VAGLMHDVGK MMIAPDVLNK PGRLTHEEFE TMKAHPELGL KILKENQPVA AMVMDVCLHH HEKIDGSGYP HGLQGEQISI FARMGAVCDV YDAITSDRPY KKGWGVAHSI REMASWKGHF DERVFQSFVK TVGIYPIGTL VRLESGRLGV VVEQSEESLL KPRVKVFMSA RTGKTFAAQI IDLGCSADPD AIVKIELPGD WGLAEVDTLW AGTPA
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