Gene PSPTO_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1132 
Symbol 
ID1182768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1244010 
End bp1244504 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID637392511 
Producthypothetical protein 
Protein accessionNP_790966 
Protein GI28868347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.208434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAC TGATCCCCGG CGCTCTGGCG TTGGTGCTGC TGTCTGGCCT GACCGTCGCT 
GCACCGGTAT CGGTAGGCCC CATGCACGAC CAATACCTGC CGCCTGACGA CCTGAACCTG
CGTGAGGGGG TGCCGGAACA GCAACAGTTG ATGCAGGTGA CCGAGTACAC CATCGTTGCC
GGTAATCAGA GGCAATCCAG CCAGCAGCCG ATTCCGGTCA CTTCCCCCCT GTCGTTGCGC
CTCAAAGGCA AGTCGCTGAA CAAGGGCGCG TCGATTGCTC AGGTGCTTGT GCACTTTGAT
GGCGGCGAAA GCAAAAGCCT GAAAAAGCCG ACCTACGACG AGGCGTCCCG GACCCTGATG
CTGTATTACC CGTTGTCTCA ATACCGGGTG CTGGTGGATT TGCTGCGCAA TGAAAAAGTC
TATTGCCAGT TCCTCAGCTA CGCCAACGGC CACATCTGGG CTGATCTGCA CACCACCTCT
GCACATGCGC GTTGA
 
Protein sequence
MKLLIPGALA LVLLSGLTVA APVSVGPMHD QYLPPDDLNL REGVPEQQQL MQVTEYTIVA 
GNQRQSSQQP IPVTSPLSLR LKGKSLNKGA SIAQVLVHFD GGESKSLKKP TYDEASRTLM
LYYPLSQYRV LVDLLRNEKV YCQFLSYANG HIWADLHTTS AHAR