Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1132 |
Symbol | |
ID | 1182768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1244010 |
End bp | 1244504 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392511 |
Product | hypothetical protein |
Protein accession | NP_790966 |
Protein GI | 28868347 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.208434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTTAC TGATCCCCGG CGCTCTGGCG TTGGTGCTGC TGTCTGGCCT GACCGTCGCT GCACCGGTAT CGGTAGGCCC CATGCACGAC CAATACCTGC CGCCTGACGA CCTGAACCTG CGTGAGGGGG TGCCGGAACA GCAACAGTTG ATGCAGGTGA CCGAGTACAC CATCGTTGCC GGTAATCAGA GGCAATCCAG CCAGCAGCCG ATTCCGGTCA CTTCCCCCCT GTCGTTGCGC CTCAAAGGCA AGTCGCTGAA CAAGGGCGCG TCGATTGCTC AGGTGCTTGT GCACTTTGAT GGCGGCGAAA GCAAAAGCCT GAAAAAGCCG ACCTACGACG AGGCGTCCCG GACCCTGATG CTGTATTACC CGTTGTCTCA ATACCGGGTG CTGGTGGATT TGCTGCGCAA TGAAAAAGTC TATTGCCAGT TCCTCAGCTA CGCCAACGGC CACATCTGGG CTGATCTGCA CACCACCTCT GCACATGCGC GTTGA
|
Protein sequence | MKLLIPGALA LVLLSGLTVA APVSVGPMHD QYLPPDDLNL REGVPEQQQL MQVTEYTIVA GNQRQSSQQP IPVTSPLSLR LKGKSLNKGA SIAQVLVHFD GGESKSLKKP TYDEASRTLM LYYPLSQYRV LVDLLRNEKV YCQFLSYANG HIWADLHTTS AHAR
|
| |