Gene PSPTO_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1101 
SymbolychF 
ID1182736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1215889 
End bp1216989 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content58% 
IMG OID637392479 
ProductGTP-binding protein YchF 
Protein accessionNP_790935 
Protein GI28868316 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTCA ATTGCGGCAT CGTCGGCCTG CCTAACGTCG GCAAGTCCAC CCTGTTCAAC 
GCCCTGACCA AATCCGGTAT TGCAGCCGAA AACTTCCCCT TCTGCACCAT CGAGCCGAAC 
ACCGGCATCG TGCCAATGCC TGACCCGCGT CTGGCGGCCC TGGCGGCCAT CGTCAACCCG 
AAACGCATCC TGCCAACCAC CATGGAGTTC GTCGACATCG CCGGCCTCGT GGCAGGTGCC 
TCGAAAGGCG AAGGTCTGGG CAACAAGTTT CTCGCCAACA TCCGCGAGAC CGATGCCATA 
GCCCACGTAG TGCGCTGCTT CGAAGACGAG AACGTGATTC ACGTTTCCAA CAGCGTCGAC 
CCAAAACGCG ACATCGAGAT CATCGACCTG GAACTGATCT TCGCCGACCT CGACAGCTGC 
GAAAAACAAC TGCAAAAGGT CACGCGCAAC GCCAAGGGCG GCGACAAGGA CGCAGTGGTC 
CAGAAAGGTC TGCTCGAGCA ACTGATTGCA CACTTCAGCG AAGGCAAGCC GGCCCGCAGC 
CTGATGAAAA GCATGAGCAA TGACGACAAA GCCGTCATTC GTGGTTTCCA CCTGCTGACC 
ACCAAGCCGG TCATGTACAT TGCCAACGTC GCCGAAGACG GCTTCGAGAA CAACCCGCTG 
CTGGACGTAG TCCGCGCCAT CGCCGAAGAA GAAGGCGCAA TGCTGGTGCC GGTCTGCAAC 
AAGATCGAAG CAGAAATCGC CGAGCTCGAT GACGGCGAAG AGAAAGACAT GTTCCTTGAA 
GCCCTGGGCC TCGAAGAACC CGGTCTGAAC CGCGTGATCC GCGCCGGCTA CGAAATGCTC 
CACCTGCAGA CCTACTTCAC CGCTGGCGTC GAAGAAGTCC GCGCCTGGAC CGTCCGCGTC 
GGCGCCACCG CACCACAGGC CGCAGGCGTC ATCCACACCG ACTTTGAAAA AGGCTTTATT 
CGCGCCGAAG TCGTGGCCTA TGACGACTTT ATCCAGTTCA AGGGTGAAGC CGGCGCCAAG 
GAAGCGGGTA AGTGGCGCCT GGAAGGCAAG GAATACATCG TCAAGGACGG TGATGTGATG 
CATTTCAGGT TTAACGTGTA A
 
Protein sequence
MGFNCGIVGL PNVGKSTLFN ALTKSGIAAE NFPFCTIEPN TGIVPMPDPR LAALAAIVNP 
KRILPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI AHVVRCFEDE NVIHVSNSVD 
PKRDIEIIDL ELIFADLDSC EKQLQKVTRN AKGGDKDAVV QKGLLEQLIA HFSEGKPARS 
LMKSMSNDDK AVIRGFHLLT TKPVMYIANV AEDGFENNPL LDVVRAIAEE EGAMLVPVCN 
KIEAEIAELD DGEEKDMFLE ALGLEEPGLN RVIRAGYEML HLQTYFTAGV EEVRAWTVRV 
GATAPQAAGV IHTDFEKGFI RAEVVAYDDF IQFKGEAGAK EAGKWRLEGK EYIVKDGDVM 
HFRFNV