| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1074 |
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| Symbol | |
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| ID | 1182709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1174632 |
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| End bp | 1179317 |
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| Gene Length | 4686 bp |
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| Protein Length | 1561 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637392452 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | NP_790908 |
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| Protein GI | 28868289 |
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| COG category | [H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1216] Predicted glycosyltransferases
[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.755532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAC TTGATAGATA CGGCTACAAC CTTGATACGG GCACAGGGGT TTGGGTGCGC
TCCGACTATC AGGGCATTGC CTACAGCGAT GGCGACAACT CTGAAAACGA ACTGGCAAAG
ATTGTCCGTG AAGCCAACGA CGTCTCTGTG CTGTCAAGCG AGCTAACGCA CCACTGTACG
GACTGGCCCA AACTCTATCA CCTGAGTTCA ACCCGCGGAA ACATCTTCCG CCCGTTCGAG
CATCTTCTGG AAGGCAAATC AGTCCTCGAA ATCGGTGCTG GGTGCGGCGC GATCAGCCGA
TACCTGGGCG AGGCCGGAGC TAACGTATTG TCGCTGGAAG GTAGCCCTCG CCGCGCCGCT
ATCGCAGCGA GCAGAACCCG TGACCTGGAC AACGTCACGG TGCTGGCCGA GCGATTCGAC
GACCTGAAAG TTGATCAGCA ATTCGATGTC GTTACGCTCA TCGGCGTACT CGAATACGCC
AGCATGTTCA GCAATGACGA AGATCCGGCA TTTGGAATGC TGATGCGTGT TCGAAAGCTG
CTCAAACCTG ACGGCCACCT GTTCATTGCC ATCGAAAACC AGCTTGGCCT CAAGTATTTT
GCAGGCGCTC CAGAAGATCA CGTCGGCGTC GCGATGTATG GTATCGAAGG TCGGTATGCA
GACCGCCAGC CAAAAACATT CGGCCGTAAA GGGCTGGAAG TATTGATAGC TCGTGCAGGT
TTTGCATCAT CAAGCTTTCT GTCGCCCTAT CCTGACTACA AGATTCCCAA CTCGCTAATC
ACTGAGAACG GTTTCAGATC CAATAATTTC GACGCGGCCG CATTGGCGTG CCAGAACACT
CGAAAAGATC CACAGCTGCC GTCAAATACT ACATTTAACC TTGAAAAAGC CTGGCCGGTT
GTCATCGAAA ATCACCTGGG CATGGACCTT GCCAACTCTT TTCTGGTTGT TGCTTCGTGC
CAGCAGTATG AGGCAGTTCC TGCCGACGTT CTGGCCTATC ACTACAGCAC AGGTCGCAAT
TCCGAGTACT GCAAGGCGTC GGTTTTCGTA GAGACGCCAG AAGGGATAGA AGTTCAGTAT
CAGCGCCTTG CTGGCACAGA ATCAGAGGAA AATCCGGGAG ATCCATTCAG GTTCATACTT
CCTGCTGCTC ACGGCTACGC AAAAGGCGAC CTGCTCAGCT TGCAGTTCCT CGATGCCTCA
ACCACGCAAA ACTGGACGGT TGAGACCTTT ACCCCATTCT TGACGACCTA TCTGGATAGC
CTCAGCTACC TTTTGGCTAC CGAAGGACAT GCTTGCACGC TTGATAATGT CGATGTCTGC
CTGCCAGGTC ATTACATCGA CGCGGTTGCA CAGAACATCA TCATCGACAC CGAAGGTAAA
CCGCACCTCA TAGATATCGA ATGGGAGATG AAGGAAGGCG TCGAGCTTGG GCACCTGCTG
ATGCGCGGTC TCTTGCTGCT GATCGCCTCC ACTATTCCTT TTTACCCAAG CACCACCATG
ATCAGCCGAC GCGACTTCAT TATCCAGTTG ATCGGCAGTA CAGGCCTTGA GGTCACTGAG
GAAGAGCTGA ATCGCTATGC AGTGCTGGAA GCCATGTTTC AAGAAAGGGT AACCGGTCGT
GACGCTGCAA GCTTTCTGAA CTGGTCACCG GAAGCAACCC TTCAGAAAAT GGGGTCCCTG
AAAGACAAGA CGCCTAAACT GGCAACACTT TACATCGGCG ATTCAGAAGG GAATTTCAAA
GAAGAGCGGA CGATAAGTCA GTTTGTGCAC GACGGGCGCC AGACGCTTGT GTTCACGGTC
CCTGCGACGT ACCAATGTGC AGCGTTGCGA TTTGACCCCA CGAACATTCG TCAGTCATTT
TCGATTGACG CCATCACCAT TTTTGAAGCG AATGTGAGGG TGTGGTCCTG GCGCGACAGC
GCAGAGGCAC CTTTAAAAGC CGCTGGCACC ACTGCGTTTG TTAATGATGT CAATGACAGC
ACTATGTTCA TGGCGCTGAA TGATGATCCC CACATCGTAC TTCCGGTTGA TCTCAATTCG
CTATTAGCGA GGAAGTCGTT CAAAATACAG GTCACGTTTA CTTTATTCAC GGAAGGCCAA
GTCGCTGAAC GACTCCTTCA ACAGGAAGAG GAGCTCAAGC TAGCGCTTGA GTCTATATCG
GATTTGAATC TTAAAGATCG CTCAGCTTTA GAGGCTGTTG AAGTGGCTAA TCTCGCCGTA
GAGGAAAGTC ATCGCCTGGC GTTGGAAGAG CTTGAAGCTG AAAATCTGGC CGTGCAGGAC
AAACACCGAC AGGCCCTTGA AAAGCTGGAA GCCGAACACT TGGCCTCTCA GGAAAACCAC
CGATCTGTTC TAGAACAGTT TGAGGCGGTA CACCTCGCTT CTCAGGAAAG CTATCGACTC
GCCCTGGAAG AACGTGAAGC AGCAAACCTG GCGGCTCAAG AAAGCCATCG ACTTGCTCTG
CAAGAGCGTG AAGCCGCAAA TCTGGCCATT CAAGAAAGTC ACCGAACTGC TACGGAGAGT
CTCAAGGCTG AAAACCTTCG GGTACAGGCC GATCACCTTC GGGTATTAGC AGATATTGAT
GCCGCCACAC TAGATGCGCA AGAAAAGCAT CGTGCCAAAC TGGCAGAGCT TGAGATTGCC
ATCCTGGCAG CACAGGAAAG TCACCGCTTG GCATTGGTCG ACAAAGATAC GCATGTTCAC
AATCTGAACC TGCACATTAT TGCAATGGAG TCATCGCACA GCTGGAAAGT AACGGCACCA
CTGAGAAAAA TAACCCGATC ATTTTTCCGA GCCAAGCGTG TCGCCTCTTC GCTGCCATTG
ATCATTCGAC GCGGGGGTGG TCTTTCCAGC ACTGCCAAAA AAGCTTATCA GGTCTGGCGG
CTCAGGGGAC TGGCTGGCGT TATTGCACAG GCCCGCTGGG TAAGAGGCGA AGCACAACAT
GCTTTCGTTG GAAGCGAGCT TCGCGAAGTT CCGGATCGCC ACGATTACTC TCGCTGGGTA
CAGTACTACG ACACTCTGGG CGAAGCAGAG ATCAGTCGTA TCAATGAGCA CATGAATCGC
TGGATTGAAT ACCCGCTCAT TTCCATCATC ATGCCGGTCT ATAATCCGCC ACTGGATCTT
TTGCGTGAAG CCGTGGACAG CGTACGTGCG CAGCTCTACA CCAACTGGGA ACTGTGTCTC
GCTGACGATG CATCGACAAA TCCTGCCGTC ATCGAGTACC TGAAATCTCT CAAGGCGCAG
GACAAGCGCA TCAAAGTTGT CTTCCGCGGC AGCAATGGTC ATATATCCCA GGCCAGCAAC
TCTGCGCTGG CGGTAGCCAA AGGCGTGTTC GTTGCCCTGA TGGACAACGA CGATCTCCTA
CCCGCTCACG CGCTTTACTG GGTTGCTCGT ACAATCCGTG AAAACCCGGA TGTGGGCTTG
ATCTACTCCG ATGAGGACAA GATCGATACC GACGGGAACC GTAGTTCACC TTATTTCAAG
TCAGACTGGA ACGAGTTTCT GTTTCGCTCA CAAAATATGG TCTGTCACCT TGGCGCCTAT
CGCCGTGACC TGGTCAATGA GGTTGGGCAA TTCCGGGTAG GATTCGAGGG TGCTCAGGAT
TACGACCTGG CTTTGCGATG CGTAGAAAAG CTCAGAAGTG ATCAGATCGT CCACATTCCA
CGTGTGCTTT ACCACTGGCG CATACACGCT GGCAGCACCG CCATGGCAGG TGATGAGAAA
CCTTATGCTG CGTTGGCGGG AGTCAAAGCA CTTGATGAAC ACCTGCAGCG TAAAGGCAAC
GTTGGTACGA CAGAGCTGTT ACCTACAGGT CAGTATCGTG TGCACTACAA CCTGCCGGCA
ACACTGCCAC TGGTTACGCT TGTCATCCCG ACCCGGAATG CTCACGCATT AGTAAAACAG
TGCATTGACA GCATCCAGAA CCTGACCACC TACAAGAACT ATGAAATTAT TCTGATAGAC
AACGGTTCGG ATGATCCTGA ATCACTGGAG TATTTCGCGA AGATAGATCA GGAAGAAAAT
ATTCGCGTGC TGCGCGACGA TGGTCCGTTT AACTACTCTG CGCTCAACAA TGGCGCGGTA
CGTATCGCTA ATGGCGAGCT GATCGGCCTC ATCAATAACG ACATTGAAGT TATCACGCCG
GAATGGCTTG GTGAGATGGT CTCGATTGCA TTGCAGCCCA GAGTCGGGGC GGTAGGCGCA
AGACTCTGGT ATCCCGATAA CAGGCTGCAA CATGGCGGCG TAGTGGTAGG GATCGGTGGT
GTTGCAGGCC ACGCGCACAA GTACCTTCCA AAAGGCGCTC ACGGCTATTT CTGCAGAGCC
GAGTTGATTC AGGAGTTTTC GGCAGTAACC GCTGCATGCC TGATCATCAA AAAGTCGATT
TTTGACGAAG TCGGAGGCCT GAACGAGGCG GACCTGAAGA TTGCTTTCAA CGACGTGGAT
TTCTGCCTGA GAGTTCAGGA GGCAGGCTAT CTGAACGTGT GGACGCCGTT CTCCGAACTG
TACCACCACG AATCAGCGAC GCGCGGCCTC GAAGACACGC CTCAAAAGCA GGAGCGATTC
GGGCAAGAGA TCCGCTACAT CAAAAATCGC TGGCCGAACA TTCTGGTGGA CTACGCCTAC
AGTCCTAACC TGACGCTGGA TCACGAAGAC TTCAGTCTGG CCTGGCCTCC GAGGATTAAA
AATTGA
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| Protein sequence | MFELDRYGYN LDTGTGVWVR SDYQGIAYSD GDNSENELAK IVREANDVSV LSSELTHHCT
DWPKLYHLSS TRGNIFRPFE HLLEGKSVLE IGAGCGAISR YLGEAGANVL SLEGSPRRAA
IAASRTRDLD NVTVLAERFD DLKVDQQFDV VTLIGVLEYA SMFSNDEDPA FGMLMRVRKL
LKPDGHLFIA IENQLGLKYF AGAPEDHVGV AMYGIEGRYA DRQPKTFGRK GLEVLIARAG
FASSSFLSPY PDYKIPNSLI TENGFRSNNF DAAALACQNT RKDPQLPSNT TFNLEKAWPV
VIENHLGMDL ANSFLVVASC QQYEAVPADV LAYHYSTGRN SEYCKASVFV ETPEGIEVQY
QRLAGTESEE NPGDPFRFIL PAAHGYAKGD LLSLQFLDAS TTQNWTVETF TPFLTTYLDS
LSYLLATEGH ACTLDNVDVC LPGHYIDAVA QNIIIDTEGK PHLIDIEWEM KEGVELGHLL
MRGLLLLIAS TIPFYPSTTM ISRRDFIIQL IGSTGLEVTE EELNRYAVLE AMFQERVTGR
DAASFLNWSP EATLQKMGSL KDKTPKLATL YIGDSEGNFK EERTISQFVH DGRQTLVFTV
PATYQCAALR FDPTNIRQSF SIDAITIFEA NVRVWSWRDS AEAPLKAAGT TAFVNDVNDS
TMFMALNDDP HIVLPVDLNS LLARKSFKIQ VTFTLFTEGQ VAERLLQQEE ELKLALESIS
DLNLKDRSAL EAVEVANLAV EESHRLALEE LEAENLAVQD KHRQALEKLE AEHLASQENH
RSVLEQFEAV HLASQESYRL ALEEREAANL AAQESHRLAL QEREAANLAI QESHRTATES
LKAENLRVQA DHLRVLADID AATLDAQEKH RAKLAELEIA ILAAQESHRL ALVDKDTHVH
NLNLHIIAME SSHSWKVTAP LRKITRSFFR AKRVASSLPL IIRRGGGLSS TAKKAYQVWR
LRGLAGVIAQ ARWVRGEAQH AFVGSELREV PDRHDYSRWV QYYDTLGEAE ISRINEHMNR
WIEYPLISII MPVYNPPLDL LREAVDSVRA QLYTNWELCL ADDASTNPAV IEYLKSLKAQ
DKRIKVVFRG SNGHISQASN SALAVAKGVF VALMDNDDLL PAHALYWVAR TIRENPDVGL
IYSDEDKIDT DGNRSSPYFK SDWNEFLFRS QNMVCHLGAY RRDLVNEVGQ FRVGFEGAQD
YDLALRCVEK LRSDQIVHIP RVLYHWRIHA GSTAMAGDEK PYAALAGVKA LDEHLQRKGN
VGTTELLPTG QYRVHYNLPA TLPLVTLVIP TRNAHALVKQ CIDSIQNLTT YKNYEIILID
NGSDDPESLE YFAKIDQEEN IRVLRDDGPF NYSALNNGAV RIANGELIGL INNDIEVITP
EWLGEMVSIA LQPRVGAVGA RLWYPDNRLQ HGGVVVGIGG VAGHAHKYLP KGAHGYFCRA
ELIQEFSAVT AACLIIKKSI FDEVGGLNEA DLKIAFNDVD FCLRVQEAGY LNVWTPFSEL
YHHESATRGL EDTPQKQERF GQEIRYIKNR WPNILVDYAY SPNLTLDHED FSLAWPPRIK
N
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