| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1045 |
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| Symbol | |
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| ID | 1182679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1143628 |
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| End bp | 1144032 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392424 |
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| Product | virulence-associated protein, putative |
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| Protein accession | NP_790881 |
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| Protein GI | 28868262 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.491192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAT ACATGCTCGA CACCAATATC TGCATCTTCA CTATCAAGAA CAAGCCGGTG
TCGGTACGTG AGGCCTTCAA CCTTCATCAC GGGCAGCTGT GTATCAGCGC GATCACGTTG
ATGGAGCTTG TCTACGGCGC AGAAAAGTCT TCCAGTCCCG AAAGAAATCT TGCTGTTGTA
GAAGGTTTTG CAGCGCGTCT TGAATTGCTT CCCTACGATA GCGACGCCGC GGCTCACACC
GGCATGATCA GAGCCGAGCT GGCCAGAGCG GGTACACCGA TTGGCCCGTA CGATCAAATG
ATTGCAGGAC ATGCCCGCTC TCTTGGCCTC GTGGTCATCA CCAACAACCA GCGTGAATTC
CAGCGCGTCG AGGGGCTGAG GGTAGAAGAC TGGGTAAGCC AATGA
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| Protein sequence | MLKYMLDTNI CIFTIKNKPV SVREAFNLHH GQLCISAITL MELVYGAEKS SSPERNLAVV
EGFAARLELL PYDSDAAAHT GMIRAELARA GTPIGPYDQM IAGHARSLGL VVITNNQREF
QRVEGLRVED WVSQ
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