| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1029 |
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| Symbol | wssD |
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| ID | 1182663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1125622 |
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| End bp | 1126833 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637392408 |
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| Product | endoglucanase |
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| Protein accession | NP_790865 |
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| Protein GI | 28868246 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3405] Endoglucanase Y |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCC TGGTAATCAA TTTGCGCCGC GCTGTTGGCT GGATGACCGG TGTGCTGGCG
TCGGCGACGC TGACCCCGGC TCTTGCGGCC AGCACCTGCG ACGGCCCGGC CTGGCCGTTC
TGGCAGGACT ACGCCACGCG CTACGTGCAG GCCGACGGGC GCATGCTCGA ATCCAGCCTG
AAAGCCAACC ACAGCACCTC CGAAGGCCAG TCCTACGGCA TGCTCTTCGC CTTGGTGGCC
AATGATCGCG CGCGCTTCGA CACGCTGTGG ACGTGGACTG CCGAAAATAT GACCGGCGCC
GACCCCAGGA CACGCCTGCC CGGCTGGTTG TGGGGGCAGG GCGAAGATGG CAGCTGGAAA
CTGCAGGACG CCAACTCTGC GTCCGACGCC GACCTGTGGA TCATCTATGC GCTGCTGGAA
GCCGCCCGCA TCTGGCAGCA CCCGGCGTAT CGAAACGATG CGCTGGCACT GCTCAAGACC
GTTGAAGCGC GGCTGGTGGT CAACCTGCCG GGGCTGGGCA AGATGCTCCT GCCCGGCCCG
GAAGGTTTCG TGCAGCCCGA CCACTTATGG CGTTTGAACT CCAGTTACCT GCCGGTGCCG
CTGTTACGGC GTCTGGCCAG GGAAGAGCCG GCCGGGCCAT GGAAGGAAAT CGCCGACAAC
ACGGCAAAAC TGATCGACGC ATCCAGCCCG AAAGGCTTTA TCGCCGACTG GGTGGGTTAT
CGCGGCACAT CACCGAAAAC CGGGCTGTTC GTGGTCGATC CGGTCTCCGG CGAGCTGGGC
AGCTATGACG CGATTCGCGT CTACCTCTGG GCGGGCATGA CGCCTGCGTC CGACCCGTTG
GCCGCACGCT TGCTGGCGCG TCTCGACGGC ATGGCGGTCA GCACGGCCTC CAGCGGTACG
CCCCCGGAAA AAGTCCAGGT GATGAGTGGC GCGAGCCAGG GCCAGGCGCC GTTTGGTTAT
TCGGCGGCGT TGCTGCCGTA CTTCCAGGCC AAGGGCCAGA CGTGGCTGGC GGAACAGCAG
CAGCGCAGGG TCGAAGCCGG TGTCAGCACG GCGCTGGCCC GCGACCCGAC AGACCGTACC
GAACCTGCCT ATTACAACCT CATGCTCAGC CTGTTTGCCT TGGGCTGGGT CGAAAAACGC
TATCAGTTCC GTGAAGACGG GACCCTCAAG TTGTCATGGG AGACGTCATG CCCGCGCGCC
GCCACACGTT AG
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| Protein sequence | MPTLVINLRR AVGWMTGVLA SATLTPALAA STCDGPAWPF WQDYATRYVQ ADGRMLESSL
KANHSTSEGQ SYGMLFALVA NDRARFDTLW TWTAENMTGA DPRTRLPGWL WGQGEDGSWK
LQDANSASDA DLWIIYALLE AARIWQHPAY RNDALALLKT VEARLVVNLP GLGKMLLPGP
EGFVQPDHLW RLNSSYLPVP LLRRLAREEP AGPWKEIADN TAKLIDASSP KGFIADWVGY
RGTSPKTGLF VVDPVSGELG SYDAIRVYLW AGMTPASDPL AARLLARLDG MAVSTASSGT
PPEKVQVMSG ASQGQAPFGY SAALLPYFQA KGQTWLAEQQ QRRVEAGVST ALARDPTDRT
EPAYYNLMLS LFALGWVEKR YQFREDGTLK LSWETSCPRA ATR
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