Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0957 |
Symbol | phbA-1 |
ID | 1182586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1038333 |
End bp | 1039511 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637392334 |
Product | acetyl-CoA acetyltransferase |
Protein accession | NP_790796 |
Protein GI | 28868177 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACG TCGTTATCGT CGCCGCCACC CGCACCGCCG TGGGCAGTTT CCAGGGTTCA CTGGCCGCCG TCCCAGCTGT CGATCTGGGC GCAGCGGTCA TTCGCCAACT GTTGGCCCAG ACCGGTGTGG ACGGCGCGCT GGTCGATGAA GTCATCATGG GCCAGGTGCT GACCGCTGGC GCTGGCCAGA ATCCGGCACG CCAGGCCGCT ATCAAGGCGG GCCTGCCCTT CTCCGTGCCG GCCATGACCC TCAACAAGGT CTGCGGCTCG GGCCTCAAGA CGCTGCACCT GGCGACCCAG GCCATTCGCT GCGGTGATGC CGACATAGTC ATCGCTGGCG GACAGGAAAA CATGAGCCTG TCCAATTACG TCCTGCCGGG CGCACGCACC GGTTTGCGCA TGGGCCATGC CAGCATGATC GACACGATGA TAACCGACGG CCTGTGGGAT GCCTTCAACG ATTACCACAT GGGCATCACT GCCGAAAACC TGGCGCAGAA GTACGAGATC AGTCGTGAAG CCCAGGATGC CTTCGCGGCC TTGTCTCAGC AAAAAGCCAT CGCCGCTATC GAAGCCGGGC GCTTTGTCGA TGAAATCACC CCGATCCTGA TCCCGCAGCG CAAAGGCGAG CCGTTGTCCT TCGCCACTGA CGAACAGCCG CGGGCGGGCA CCACGGCTGA AACACTCGGC AAACTCAAAC CCGCCTTCAA GAAGGACGGC ACCGTCACGG CGGGCAATGC ATCGTCGCTC AACGACGGCG CTGCCGCAGT GATGTTGATG AGCGCGACCA AGGCAGAGCA GTTGGGCTTG CCGGTACTCG CGCACATCGC GGGATACGCC AACGCAGGTG TCGACCCGGC CATCATGGGC ATCGGCCCGG TCAGCGCGAC CCGCCGCTGC CTGGACAAGG CCGGTTGGTC ACTGGACGAA CTAGACCTGA TCGAAGCCAA CGAAGCGTTC GCCGCGCAGT CGCTGTCAGT CGGCAAAGAA TTGGGGCTGG ACCCGCAGAA GCTCAACGTC AACGGCGGCG CAATCGCCAT TGGCCACCCC ATTGGCGCAT CAGGCTGCCG CGTGCTGGTG ACGCTACTGC ACGAGATGAT CAGGCGTGAT GCGAAAAAAG GCCTGGCCAC GCTGTGTATC GGCGGTGGCC AGGGTGTTGC CCTCGCGCTG GCACGCTGA
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Protein sequence | MQDVVIVAAT RTAVGSFQGS LAAVPAVDLG AAVIRQLLAQ TGVDGALVDE VIMGQVLTAG AGQNPARQAA IKAGLPFSVP AMTLNKVCGS GLKTLHLATQ AIRCGDADIV IAGGQENMSL SNYVLPGART GLRMGHASMI DTMITDGLWD AFNDYHMGIT AENLAQKYEI SREAQDAFAA LSQQKAIAAI EAGRFVDEIT PILIPQRKGE PLSFATDEQP RAGTTAETLG KLKPAFKKDG TVTAGNASSL NDGAAAVMLM SATKAEQLGL PVLAHIAGYA NAGVDPAIMG IGPVSATRRC LDKAGWSLDE LDLIEANEAF AAQSLSVGKE LGLDPQKLNV NGGAIAIGHP IGASGCRVLV TLLHEMIRRD AKKGLATLCI GGGQGVALAL AR
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