Gene PSPTO_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0957 
SymbolphbA-1 
ID1182586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1038333 
End bp1039511 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID637392334 
Productacetyl-CoA acetyltransferase 
Protein accessionNP_790796 
Protein GI28868177 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGACG TCGTTATCGT CGCCGCCACC CGCACCGCCG TGGGCAGTTT CCAGGGTTCA 
CTGGCCGCCG TCCCAGCTGT CGATCTGGGC GCAGCGGTCA TTCGCCAACT GTTGGCCCAG
ACCGGTGTGG ACGGCGCGCT GGTCGATGAA GTCATCATGG GCCAGGTGCT GACCGCTGGC
GCTGGCCAGA ATCCGGCACG CCAGGCCGCT ATCAAGGCGG GCCTGCCCTT CTCCGTGCCG
GCCATGACCC TCAACAAGGT CTGCGGCTCG GGCCTCAAGA CGCTGCACCT GGCGACCCAG
GCCATTCGCT GCGGTGATGC CGACATAGTC ATCGCTGGCG GACAGGAAAA CATGAGCCTG
TCCAATTACG TCCTGCCGGG CGCACGCACC GGTTTGCGCA TGGGCCATGC CAGCATGATC
GACACGATGA TAACCGACGG CCTGTGGGAT GCCTTCAACG ATTACCACAT GGGCATCACT
GCCGAAAACC TGGCGCAGAA GTACGAGATC AGTCGTGAAG CCCAGGATGC CTTCGCGGCC
TTGTCTCAGC AAAAAGCCAT CGCCGCTATC GAAGCCGGGC GCTTTGTCGA TGAAATCACC
CCGATCCTGA TCCCGCAGCG CAAAGGCGAG CCGTTGTCCT TCGCCACTGA CGAACAGCCG
CGGGCGGGCA CCACGGCTGA AACACTCGGC AAACTCAAAC CCGCCTTCAA GAAGGACGGC
ACCGTCACGG CGGGCAATGC ATCGTCGCTC AACGACGGCG CTGCCGCAGT GATGTTGATG
AGCGCGACCA AGGCAGAGCA GTTGGGCTTG CCGGTACTCG CGCACATCGC GGGATACGCC
AACGCAGGTG TCGACCCGGC CATCATGGGC ATCGGCCCGG TCAGCGCGAC CCGCCGCTGC
CTGGACAAGG CCGGTTGGTC ACTGGACGAA CTAGACCTGA TCGAAGCCAA CGAAGCGTTC
GCCGCGCAGT CGCTGTCAGT CGGCAAAGAA TTGGGGCTGG ACCCGCAGAA GCTCAACGTC
AACGGCGGCG CAATCGCCAT TGGCCACCCC ATTGGCGCAT CAGGCTGCCG CGTGCTGGTG
ACGCTACTGC ACGAGATGAT CAGGCGTGAT GCGAAAAAAG GCCTGGCCAC GCTGTGTATC
GGCGGTGGCC AGGGTGTTGC CCTCGCGCTG GCACGCTGA
 
Protein sequence
MQDVVIVAAT RTAVGSFQGS LAAVPAVDLG AAVIRQLLAQ TGVDGALVDE VIMGQVLTAG 
AGQNPARQAA IKAGLPFSVP AMTLNKVCGS GLKTLHLATQ AIRCGDADIV IAGGQENMSL
SNYVLPGART GLRMGHASMI DTMITDGLWD AFNDYHMGIT AENLAQKYEI SREAQDAFAA
LSQQKAIAAI EAGRFVDEIT PILIPQRKGE PLSFATDEQP RAGTTAETLG KLKPAFKKDG
TVTAGNASSL NDGAAAVMLM SATKAEQLGL PVLAHIAGYA NAGVDPAIMG IGPVSATRRC
LDKAGWSLDE LDLIEANEAF AAQSLSVGKE LGLDPQKLNV NGGAIAIGHP IGASGCRVLV
TLLHEMIRRD AKKGLATLCI GGGQGVALAL AR