Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0903 |
Symbol | |
ID | 1182532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 983280 |
End bp | 984257 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637392280 |
Product | ISPssy, transposase |
Protein accession | NP_790742 |
Protein GI | 28868123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.25457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA TGACCTTCGC CGATGCCGAG TACGCGGGTA AACGTAAGCA TACCCGCCGC GAGCGCTTTC TCATCGAGAT GGATCAGGTT GTGCCCTGGA AAGGCTTGAT TGCCCTTATC GAACCACATT ATCCAAAGGG CGAAGGTGGC CGTCCGGCTT ATCCGCTGAT GGCGATGCTG CGTATTCACC TGATGCAGAA CTGGTTTGGT TACAGCGATC CGGCGATGGA GGAAGCACTT TACGAGACAA CGATCCTGCG CCAGTTCGCA GGGTTGAGTC TGGATCGAAT CGCCGATGAA ACCACGATTC TCAACTTCCG GCGTCTGTTG GAAAAGCATG AGTTGGCAGG CGGGATTTTG CAGGTCATCA ATGGCTATCT GGGTGATCGA GGTTTGATGC TGCGCCAAGG TACGGTGGTC GATGCGACGA TCATTCATGC GCCGAGCTCG ACCAAGAACA AGGACGGCAA ACGCGATCCC GAAATGCATC AGACGAAGAA AGGAAACCAG TATTTCTTCG GCATGAAAGC GCATATCGGC GTCGATGCCG AGTCGGGTTT AGTCCATAGC CTGGTGGGTA CTGCGGCGAA TGTGGCGGAC GTGACTCAGG TTGATCAATT GCTACATGGT GAGGAAACCT ATGTCAGCGG TGATGCGGGC TACACCGGCG TGGACAAGCG TGCGGAGCAT CAGGATCGTC AGATGATCTG GTCAATTGCG GCCCGCCCAA GCCGTTATAA AAAGCATGGC GAGAAAAGTT TGATCGCACG GGTCTATCGC AAAATCGAGT TCACGAAAGC CCAGTTACGG GCGAAGGTTG AACATCCGTT TCGCGTGATC AAGCGCCAGT TTGGTTATAC GAAAGTCCGG TTTCGCGGGC TGGCTAAAAA CACCGCGCAA CAGGCTACTC TGTTTGCCTT GTCGAACCTT TGGATGGTGC GAAAACGGCT GCTGGCGATG GGAGAGGTGC GCCTGTAA
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Protein sequence | MKQMTFADAE YAGKRKHTRR ERFLIEMDQV VPWKGLIALI EPHYPKGEGG RPAYPLMAML RIHLMQNWFG YSDPAMEEAL YETTILRQFA GLSLDRIADE TTILNFRRLL EKHELAGGIL QVINGYLGDR GLMLRQGTVV DATIIHAPSS TKNKDGKRDP EMHQTKKGNQ YFFGMKAHIG VDAESGLVHS LVGTAANVAD VTQVDQLLHG EETYVSGDAG YTGVDKRAEH QDRQMIWSIA ARPSRYKKHG EKSLIARVYR KIEFTKAQLR AKVEHPFRVI KRQFGYTKVR FRGLAKNTAQ QATLFALSNL WMVRKRLLAM GEVRL
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