Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0849 |
Symbol | |
ID | 1182478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 917806 |
End bp | 918744 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392226 |
Product | hypothetical protein |
Protein accession | NP_790689 |
Protein GI | 28868070 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCTGC GCAAGCCTTC GGCATGGACG GCCTTGGCCC TGTCGATCTC GACCGGGCCA GCCGCCGCCG GTACAGTGAC CTCGGCCACC CTCGCCGCCT CAACCCTGTC GCCTGACTGC CTGGAGTACA AGGTGGTCGG CATATGCTAC TGGCTGCTCT GCACGCCGTT TGGCTGCAAG GTCAAGACGT CGACCAAGGT TCGACATTAT GTTCCCGACG CGGTTGTATC GAGCTACTCG AACACTGGGG AAAACCCTTG GGTCGAAGTC TCTTCGCTGA GTTCACCCAC TTCATTCGCC CAGGATGGCG GCGACGGAAC CACCAGCCAC AACAACGAAG ACAACCTGGC CAAATTCAAA AACACTGACG TCATTGGCCA CCCCGGGGGA GCTACGTTCA GTAAGTTTGC CAGCGCTTCG GGGTATGCCT GTCAGGGTGC TGCGACCCCC TACATGCCTT ACCTGCTGAG CACGCTGGAC ACCATCGCCT GGCGTTATGG TGTTCCAGAA TCAGCCTATC CCGAAGCCCT GATTCCCGGT CAGCGAGAGG TGGGCGGTCT CACCTCGGGG GACATGTGGG GAAGCCTTTA TCCCCGTAGT GGTTTTATCC ATCAAGCCGA CGATTACAAG GCAGCGGCCG TGATCGCGCA GCGCGCTGGT GACGTGGTCA CTCGCCGCGG TCAGATTCAC ATCTATCAAC CCCTTCTGGC AAAACCTCAG TCAGGCTACT GGCCTGCTGG GGAATTGATC GAGACCGACG CCAGCACCGG TAAGTGGCAA GAGCTCACGC CGACCCTCAG TCAAAGCTGT GCGGTATTCC CGAACTCGCA GCCCCGTGTG CAGGCGACCG ATGGCGGTTA TGCCTGGGCG CTATGGCGAC CCTATTCCTG CTGCAAGCGG CAAGGACAAA CTTTTCTTGG CAGTACGGAC TTTCAATGA
|
Protein sequence | MNLRKPSAWT ALALSISTGP AAAGTVTSAT LAASTLSPDC LEYKVVGICY WLLCTPFGCK VKTSTKVRHY VPDAVVSSYS NTGENPWVEV SSLSSPTSFA QDGGDGTTSH NNEDNLAKFK NTDVIGHPGG ATFSKFASAS GYACQGAATP YMPYLLSTLD TIAWRYGVPE SAYPEALIPG QREVGGLTSG DMWGSLYPRS GFIHQADDYK AAAVIAQRAG DVVTRRGQIH IYQPLLAKPQ SGYWPAGELI ETDASTGKWQ ELTPTLSQSC AVFPNSQPRV QATDGGYAWA LWRPYSCCKR QGQTFLGSTD FQ
|
| |