Gene PSPTO_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0849 
Symbol 
ID1182478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp917806 
End bp918744 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content59% 
IMG OID637392226 
Producthypothetical protein 
Protein accessionNP_790689 
Protein GI28868070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC GCAAGCCTTC GGCATGGACG GCCTTGGCCC TGTCGATCTC GACCGGGCCA 
GCCGCCGCCG GTACAGTGAC CTCGGCCACC CTCGCCGCCT CAACCCTGTC GCCTGACTGC
CTGGAGTACA AGGTGGTCGG CATATGCTAC TGGCTGCTCT GCACGCCGTT TGGCTGCAAG
GTCAAGACGT CGACCAAGGT TCGACATTAT GTTCCCGACG CGGTTGTATC GAGCTACTCG
AACACTGGGG AAAACCCTTG GGTCGAAGTC TCTTCGCTGA GTTCACCCAC TTCATTCGCC
CAGGATGGCG GCGACGGAAC CACCAGCCAC AACAACGAAG ACAACCTGGC CAAATTCAAA
AACACTGACG TCATTGGCCA CCCCGGGGGA GCTACGTTCA GTAAGTTTGC CAGCGCTTCG
GGGTATGCCT GTCAGGGTGC TGCGACCCCC TACATGCCTT ACCTGCTGAG CACGCTGGAC
ACCATCGCCT GGCGTTATGG TGTTCCAGAA TCAGCCTATC CCGAAGCCCT GATTCCCGGT
CAGCGAGAGG TGGGCGGTCT CACCTCGGGG GACATGTGGG GAAGCCTTTA TCCCCGTAGT
GGTTTTATCC ATCAAGCCGA CGATTACAAG GCAGCGGCCG TGATCGCGCA GCGCGCTGGT
GACGTGGTCA CTCGCCGCGG TCAGATTCAC ATCTATCAAC CCCTTCTGGC AAAACCTCAG
TCAGGCTACT GGCCTGCTGG GGAATTGATC GAGACCGACG CCAGCACCGG TAAGTGGCAA
GAGCTCACGC CGACCCTCAG TCAAAGCTGT GCGGTATTCC CGAACTCGCA GCCCCGTGTG
CAGGCGACCG ATGGCGGTTA TGCCTGGGCG CTATGGCGAC CCTATTCCTG CTGCAAGCGG
CAAGGACAAA CTTTTCTTGG CAGTACGGAC TTTCAATGA
 
Protein sequence
MNLRKPSAWT ALALSISTGP AAAGTVTSAT LAASTLSPDC LEYKVVGICY WLLCTPFGCK 
VKTSTKVRHY VPDAVVSSYS NTGENPWVEV SSLSSPTSFA QDGGDGTTSH NNEDNLAKFK
NTDVIGHPGG ATFSKFASAS GYACQGAATP YMPYLLSTLD TIAWRYGVPE SAYPEALIPG
QREVGGLTSG DMWGSLYPRS GFIHQADDYK AAAVIAQRAG DVVTRRGQIH IYQPLLAKPQ
SGYWPAGELI ETDASTGKWQ ELTPTLSQSC AVFPNSQPRV QATDGGYAWA LWRPYSCCKR
QGQTFLGSTD FQ