Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0833 |
Symbol | |
ID | 1182462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 903831 |
End bp | 904853 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392215 |
Product | ISPsy4, transposase |
Protein accession | NP_790678 |
Protein GI | 28868059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACCC AGGAGCAGTC TGTGGAAATT AAAGTGTTGG CCCGTCAGGG CCATGGCATC AAATTCATCG CCCGTGAGCT GGGTATTTCG CGTAACACCG TGCGCAAGTA CCTGCGAAAG GCCCGGTCGC TACCCAGTGA CAAGGTGAGA CCCGCACGTC CGTGCAAAAT CGACCCCTTC AAGGACTACC TGCACGAGCG TATTGAGGCG GCGCGCCCAC ACTGGATTCC GGCGACCGTC CTGCTGCGTG AGATCACGGC ATTGGGGTAC AGCGGCGGCG TCAGTCGTCT GAAGGCTTAT ATTCGCCCCT TCAAACGTAA GGCAGAAGAG CCGGTGGTAC GTTTCGAGAC ACTGCCCGGC AAGCAGATAC AGGTGGACTT CACCACCATT CGACGAGGCC GTCAGCCGCT TAAGGCGTTC GTGGCGACAC TTGGTTTTAG TCGAGCAAGC TTTGTCCGTT TCTCCGAGCG AGAGGACAGC GAAGCCTGGC TGACAGGGCT TCGGGAGGCG TTCGCTTACT TTGGCGGCGT GCCCGAGCAG GCATTGTTTG ATAACGCCGG AACCATCATC ACCGAGCGAG ATGCTTTTGG GGAGGGCCAG CACCGTTGGC ATCCCCGATT GGCTGCGCTG GCCGATGAGT TTGGTTTTAT TCCCAAGGTC TGCCGCCCTT ACCGTGCCCA GACCAAGGGC AAGGTTGAGC GCTTCAACGG GTATCTGAAG GGCAGTTTCA TTACCCCGTT GGCCGCTACG CTCAAGAGTG CGGGTCTGAC GCTGGATGTG GTGACGGCCA ACGCACATAT CGGCCAATGG CTCGACGAAG TCGCTCATCA GCGGATTCAC GGCACGACGG GTGTTCAACC GGCGGTACGT CTGGCCCAAG AGCAGCAGGT ACTATTACCA CTGCCAACAC AGAGCCTGCG CCCACAACCC GCCCAAGGCC TACGCCTGGG ACGGGTCCTG CCGTACGAGA GCTTGCAGCA TCCGCTGTCG GTTTATGAGC AACTGCTGGA GGTGAGAGCA TGA
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Protein sequence | MLTQEQSVEI KVLARQGHGI KFIARELGIS RNTVRKYLRK ARSLPSDKVR PARPCKIDPF KDYLHERIEA ARPHWIPATV LLREITALGY SGGVSRLKAY IRPFKRKAEE PVVRFETLPG KQIQVDFTTI RRGRQPLKAF VATLGFSRAS FVRFSEREDS EAWLTGLREA FAYFGGVPEQ ALFDNAGTII TERDAFGEGQ HRWHPRLAAL ADEFGFIPKV CRPYRAQTKG KVERFNGYLK GSFITPLAAT LKSAGLTLDV VTANAHIGQW LDEVAHQRIH GTTGVQPAVR LAQEQQVLLP LPTQSLRPQP AQGLRLGRVL PYESLQHPLS VYEQLLEVRA
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