| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0775 |
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| Symbol | mmsA-1 |
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| ID | 1182395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 825456 |
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| End bp | 826949 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392150 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | NP_790622 |
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| Protein GI | 28868003 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00425927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA TCCAGCATCT GATTCACGGC AAGTTTGTAG CCGATGATGG CCGTACCGCC
GATGTCTTCA ATCCATCGAC CGGGCAGGTT ATCCACCAAG TGGCGCTCGC CAGTCGCGAA
ACAGTGCAAA AGGCCATCGA ATCGGCCAAG TCGGCTTTCC CGGCCTGGCG TAATACACCG
CCGGCCAAAC GTGCGCAGGT AATGTTTCGC TTCAAGCAAT TGCTGGAGCA GAACGAAGCG
CGCATTGCCC AACTGATCAG CGAAGAGCAT GGCAAGACAC TGGAAGACGC TGCGGGCGAG
CTGAAACGCG GTATCGAAAA TGTCGAGTAC GCCTGCGCTG CGCCGGAAAT CCTCAAGGGC
GAGTACAGCC GCAACGTCGG GCCGAACATT GATGCGTGGT CCGACTTCCA GCCGCTGGGT
ATCGTTGCTG GTATTACACC GTTCAACTTC CCGGCGATGG TGCCGCTGTG GATGTACCCG
CTGGCCATCG CTTGTGGTAA CTGCTTTATC CTCAAGCCTT CCGAGCGTGA TCCGAGCTCT
ACGCTTTTGA TTGCCGAGTT GTTGCACGAA GCCGGGCTGC CGAAGGGCGT ATTGAATGTG
GTGCATGGCG ACAAGGTTGC GGTTGATGCG CTGATCGAAG CGCCTGAGGT CAAGGCGCTG
AGTTTTGTCG GATCTACACC GATTGCCGAG TACATCTATA AGGAAGGCGC AGCACGGGGC
AAGCGCGTTC AGGCCTTGGG CGGGGCCAAT AATCATGCTG TGCTGATGCC GGATGCCGAC
CTGGACAACG CCGTCAGTGC CTTGATGGGC GCCGCTTATG GTTCCTGCGG TGAGCGCTGC
ATGGCGATCT CGGTCGCGGT CTGCGTCGGT GATCAGATTG CCGATGCGCT GGTGGCCAAA
CTGGTTCCAC ACATTCAGAG CCTCAAGATC GGTGCGGGCA CCACCTGCGG GCTGGACATG
GGGCCGCTGG TCACCGGTCA GCATCGCGAC AAGGTCAGTG GTTACATTGC CGATGGCGTG
GCGTCGGGCG CTACCCTGGT GGTGGACGGG CGAGACCTTC AGGTGGCCGG GCACGAACAG
GGCTTCTTTA TGGGTGGCTG CCTGTTTGAT CGTGTGACGC CGCAAATGCG CATCTATAAA
GAGGAGATCT TCGGGCCGGT GCTGTGCATC GTGCGCGTCG ATAGCCTTGA GCAGGCCATG
CAGCTCATCA ACGACCACGA ATACGGCAAC GGTACGTGCA TCTTTACCCG GGATGGCGAA
GCGGCGCGGC TGTTCTGTGA CGAGATTGAA GTGGGGATGG TCGGGGTCAA TGTGCCGCTG
CCGGTGCCGG TGGCGTACCA CAGCTTTGGC GGCTGGAAGC GTTCTCTTTT TGGCGACCTG
CATGCGTATG GGCCGGATGG TGTGCGCTTC TATACGCGCC GCAAGGCGAT TACCCAGCGC
TGGCCGCAGC GTGCCAGCCA TGAAGCATCG CAATTTGCGT TCCCTAGCCT GTAA
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| Protein sequence | MSSIQHLIHG KFVADDGRTA DVFNPSTGQV IHQVALASRE TVQKAIESAK SAFPAWRNTP
PAKRAQVMFR FKQLLEQNEA RIAQLISEEH GKTLEDAAGE LKRGIENVEY ACAAPEILKG
EYSRNVGPNI DAWSDFQPLG IVAGITPFNF PAMVPLWMYP LAIACGNCFI LKPSERDPSS
TLLIAELLHE AGLPKGVLNV VHGDKVAVDA LIEAPEVKAL SFVGSTPIAE YIYKEGAARG
KRVQALGGAN NHAVLMPDAD LDNAVSALMG AAYGSCGERC MAISVAVCVG DQIADALVAK
LVPHIQSLKI GAGTTCGLDM GPLVTGQHRD KVSGYIADGV ASGATLVVDG RDLQVAGHEQ
GFFMGGCLFD RVTPQMRIYK EEIFGPVLCI VRVDSLEQAM QLINDHEYGN GTCIFTRDGE
AARLFCDEIE VGMVGVNVPL PVPVAYHSFG GWKRSLFGDL HAYGPDGVRF YTRRKAITQR
WPQRASHEAS QFAFPSL
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