Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0773 |
Symbol | |
ID | 1182393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 822968 |
End bp | 823888 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392148 |
Product | transcriptional regulator, LysR family |
Protein accession | NP_790620 |
Protein GI | 28868001 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0564759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCC GCCGCTCCGA CCCGTTGGCC CAGGTCAGTG ATTTTGACAT TCGCTTGCTG CGCATCTTCA AGAGCGTAGT CGAGGCTGGG GGCTTTTCAG CTGCAGAAAG TGCGCTTGGC ATCGGCAGAT CGGCGATCAG CCAGCAGATG AGCGATCTGG AACAACGCCT TGGTTTGCGT CTGTGTCAGC GGGGGCGAGC AGGGTTTTCA CTGACCGATG AGGGGCGCGA GGTTTATCAG TCATCGCTGC AACTGCTCAG TGCGCTGGAG AGCTTTCGCA CTGAGGTCAA CGGCCTGCAC CAGAACCTGC GCGGCGAGCT GAACATAGGC CTGACCGATA ACCTCGTCAC CCTCCCCCAC ATGCGCATAA CCCATGCACT GTCGCGCCTT AAAGAACGTG GGCCTGGCGT GCATATCAAT ATCCGCATGA TCGCGCCCGC CGAAGTCGAG CAAGGCGTAC TCGACGGCGG CCTGCATGTT GGCGTGGTGC CGCAGGCCAG CGCGCTGCCG GGGCTGGAAT ATCATTCGTT GTACAGCGAG CGCTCGCTGC TTTATTGCGC GGTGGGTCAT CCGTTGTTCT ATGCAGAAAA CACAATGCTC GACGACCAGC GTCTCGCGCT ACAGGAAGCC GTTGCTCCAA CCTTCCGCCT GCCGAACGAT ATTCAGGAGC ACTACAAGGC ATTGACATGC ACCGCCAGTG CCTCCGACCG GGAAGGCATC GCGTTCCTCA TTCTGACCGG GCGCTACATC GGCTATCTGC CGGATCATTA CGCCAACGCC TGGGTGCAGG AAGGCAGGTT GCGCGCATTG AAACCGGACG CGAAATTTTA CGACCTCAAT CTGGTCACCG TCACCCGCAA AGGCCGACGC CCTCATTTGG TGCTCGAAGG CTTTCTGGAA GCGCTTGCTG CTACCCGATG A
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Protein sequence | MSIRRSDPLA QVSDFDIRLL RIFKSVVEAG GFSAAESALG IGRSAISQQM SDLEQRLGLR LCQRGRAGFS LTDEGREVYQ SSLQLLSALE SFRTEVNGLH QNLRGELNIG LTDNLVTLPH MRITHALSRL KERGPGVHIN IRMIAPAEVE QGVLDGGLHV GVVPQASALP GLEYHSLYSE RSLLYCAVGH PLFYAENTML DDQRLALQEA VAPTFRLPND IQEHYKALTC TASASDREGI AFLILTGRYI GYLPDHYANA WVQEGRLRAL KPDAKFYDLN LVTVTRKGRR PHLVLEGFLE ALAATR
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