Gene PSPTO_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0771 
Symbol 
ID1182391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp820630 
End bp821286 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID637392146 
Producttranscriptional regulator, TetR family 
Protein accessionNP_790618 
Protein GI28867999 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.353788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTTG AAGTTCCAGC ACACAGCGCC ACCAAGCCTG CGAGCCGTAT TCGTCAGAAG 
AACGAAGAAA CGATCATCCA GGCCGCCGAA GACGAATTTG CCCGCCACGG TTTCAAGGGC 
ACCAGCATGA ACACCATTGC GCTGAAAGCC GGACTGCCGA AAGCCAACCT TCATTATTAC 
TTCACCAACA AGCTGGGCCT GTATGTCGCG GTGCTGAGCA ATATCATTGA TTTGTGGGAC 
AGCACGTTCA ACAACCTCAG CGTCGACGAC GACCCGGCAG AAGCGCTGGC CCGCTATATT 
CGCGCCAAGA TGGAGTTCTC GCGCCGGCAA CCGCAGGCAT CACGAATCTT CGCCATGGAG 
ATCATCAGCG GCGGCGAATG CATGAGCGAA TATTTCAGCC AGGATTACCG CCTCTGGTTT 
CAGGGGCGGG CAGCGGTCTT TCAAGCCTGG ATCGATGCCG GAAAGATGGA CCCGGTCGAT 
CCGGTGCACC TGATCTTTCT GCTGTGGGGC AGCACCCAGC ACTATGCCGA CTTCGCCTCG 
CAGATCTGTC GTGTCACCGG CCGCTCTCGC CTGACCCGGC AGGACATGGA TCAGGCCAGC 
AACAATCTGA TCCGGATCAT CCTCAAAGGT TGTGGGCTGA CACCGCCAGC CTTGTAG
 
Protein sequence
MTLEVPAHSA TKPASRIRQK NEETIIQAAE DEFARHGFKG TSMNTIALKA GLPKANLHYY 
FTNKLGLYVA VLSNIIDLWD STFNNLSVDD DPAEALARYI RAKMEFSRRQ PQASRIFAME 
IISGGECMSE YFSQDYRLWF QGRAAVFQAW IDAGKMDPVD PVHLIFLLWG STQHYADFAS 
QICRVTGRSR LTRQDMDQAS NNLIRIILKG CGLTPPAL