Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0729 |
Symbol | mpl |
ID | 1182349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 778928 |
End bp | 780277 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392104 |
Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
Protein accession | NP_790576 |
Protein GI | 28867957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.511021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATTC ATATCCTTGG TATCTGCGGC ACGTTCATGG GTTCGCTGGC GGTACTCGCC AAAGAGTTGG GGCATCGGGT CACCGGCTCC GACGCCAACG TCTACCCGCC GATGAGTACC CAGCTCCAGG CCCAGGGTAT CGAGCTGACT CAGGGTTACG ACCCTGTGCA GCTGGTTCCG GCGCCGGATC TGGTGGTGGT CGGCAACGCA CTGTCGCGTG GCAATCCGTC GGTTGAATAT GTCCTGAATA AAGGTTTGCC ATATGTGTCT GGCCCGCAAT GGCTGGCAGA CCACGTGTTG CAGGGTCGCT GGGTACTGGC GGTAGCCGGC ACGCACGGCA AGACCACCAC CAGCAGCATG CTGGCCTGGG TGTTGGAGCA CGCGGGCATG AGCCCTGGCT TTCTGATCGG CGGTATCCCG CAGAATTTCG CGGTGTCGGC GCGCCTGGGG GAAACCCCGT TCTTTGTGGT GGAAGCCGAC GAATACGACA GTGCCTTCTT CGACAAGCGC TCCAAGTTCG TTCATTACCG CCCGCGTACT GCGATCCTCA ACAACCTTGA GTTCGATCAC GCCGACATTT TCCCCGATCT GCCCGCCATC GAGCGCCAGT TTCACCATCT GGTGCGCACC ATTCCGAGCG AAGGCCTGGT GATTCATCCG ACCACCGAGC CTGCGCTGTC ACGCGTCATC AAGATGGGCT GCTGGACACC GGTGCAAACC ACAGGCGAGG GCGGTCAGTG GCAGGCACGG TTGTTGAGTG AAGACGGTTC GCGTTTTGAA GTGCTGTTCG AGGGCGAGCT GCAGGGCGCG GTCGAATGGG ACATGACTGG CCTGCACAAC GTCGCCAATG CGCTGGCGAC CCTCGCTGCA GCCCGTCACG TCGGTGTTGT TCCGCTGCTG GGCGTGCAGG CATTGAGCGC GTTCAAAAGC GTCAAGCGCC GTATGGAAAA GGTCGCCGAC GTGCACGGCA TCACTATTTA TGACGACTTC GCTCATCACC CGACCGCGAT TGCCACCACG CTGGATGGCC TGCGCAAAAA GGTTGGTGAT GCACCGATCA TTGCCGTGAT CGAGCCGCGT TCCAACTCCA TGAAGCTGGG CGCGCACCGC GACGGTCTGC CGGAAAGTGT GCAGCAGGCT GATCAGGTGG TCTGGTACGC GCCACCCAAT CTGGGTTGGG ACCTGGCTGC AACAGTCGCC GGAGGCACTG TGCCTGCGTT GGTCTGTGAT TCCCTTGAGG CAATCATCGC CCAGGTCAAA AGCCAGGCGC AGCCCGGTAC GCACATTGTC ATCATGAGTA ACGGCGGTTT TGGCGGCCTG CATGGCAAGC TCGCGGAGGC GTTGCAATGA
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Protein sequence | MHIHILGICG TFMGSLAVLA KELGHRVTGS DANVYPPMST QLQAQGIELT QGYDPVQLVP APDLVVVGNA LSRGNPSVEY VLNKGLPYVS GPQWLADHVL QGRWVLAVAG THGKTTTSSM LAWVLEHAGM SPGFLIGGIP QNFAVSARLG ETPFFVVEAD EYDSAFFDKR SKFVHYRPRT AILNNLEFDH ADIFPDLPAI ERQFHHLVRT IPSEGLVIHP TTEPALSRVI KMGCWTPVQT TGEGGQWQAR LLSEDGSRFE VLFEGELQGA VEWDMTGLHN VANALATLAA ARHVGVVPLL GVQALSAFKS VKRRMEKVAD VHGITIYDDF AHHPTAIATT LDGLRKKVGD APIIAVIEPR SNSMKLGAHR DGLPESVQQA DQVVWYAPPN LGWDLAATVA GGTVPALVCD SLEAIIAQVK SQAQPGTHIV IMSNGGFGGL HGKLAEALQ
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