Gene PSPTO_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0674 
Symbol 
ID1182294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp729541 
End bp730344 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID637392049 
ProducttonB domain protein 
Protein accessionNP_790521 
Protein GI28867902 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGC TGATCCTGCC CCGCCGACTA CCGCCGCGTC AGTTACGCCA CTGGCCAGAA 
CAGCCAAACG GCGGCTGCCC GGTCGCCCCG TCTTCGCTGC GCGTGCCGCA ACAGAACCCG
GCGCAACCAC GAGCATGGCC GCAAAACGCA CTGGCGATCA TGGTTGCGCT CGGTTTGCAT
GCTGCACTGG CGTATTGGCT GACAGCCGAG CACCGACAGG CGCCCGAACC CACGCCGCCA
ATGCCGATCA CTGTGCAATG GGTGCCGCCG CCAGCCCCCG TGCCAGCCAC GCAGCCCGTT
TCACAACCGA CGCCACAGCC TGCGGCCGAA CCACAGCAGC AGGCTCCCGC GCCTGCTGCG
CCTAACCCCA CAGCATTGCC CAGGCCCAAA ACGCAGGCGA AAACGGCCGC AGCAAAACCC
GCCGCACCGA CGCATTCCGC GGCACCTTCT ACAGCACCGA CGACACCTGC GCCCGCGCCA
GCACCGTCGC CAGCTGCAGC ACCTGCGCCA GCACAGACCA CCACTGCGCC CATAGGCCGG
GCCGGTTACC TGAACAACCC GCCCCCGGTC TACCCGCCCG CCGCTGCGCG CAGGCACCAG
GAAGGCACGA CATTGCTGCG CGTTCATGTG CTGCCCAGCG GACGTACCGA TCAGGTGCAA
GTGCTGCAAA GCAGTGGCGT CCCGGCGCTG GACGAAGCCG CGCAGGCCGC TGTCCGGCAA
TGGACTTTTA TTCCCGCCAA ACGCGGCGAA ACCCCGGTTG AAGGCTGGGT CAACGTGCCC
CTGGCTTTCA AACTCGCACC CTGA
 
Protein sequence
MSTLILPRRL PPRQLRHWPE QPNGGCPVAP SSLRVPQQNP AQPRAWPQNA LAIMVALGLH 
AALAYWLTAE HRQAPEPTPP MPITVQWVPP PAPVPATQPV SQPTPQPAAE PQQQAPAPAA
PNPTALPRPK TQAKTAAAKP AAPTHSAAPS TAPTTPAPAP APSPAAAPAP AQTTTAPIGR
AGYLNNPPPV YPPAAARRHQ EGTTLLRVHV LPSGRTDQVQ VLQSSGVPAL DEAAQAAVRQ
WTFIPAKRGE TPVEGWVNVP LAFKLAP