Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0663 |
Symbol | ugpA |
ID | 1182283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 716039 |
End bp | 716932 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392038 |
Product | glycerol-3-phosphate ABC transporter, permease protein |
Protein accession | NP_790510 |
Protein GI | 28867891 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCGG GTGCGCATTT TCCGCAACCG CGTTTGGCGC TGCTGTTCGC GCTGCCGCAG TTGCTCGCGC TCGGGCTGTT TTTCTATTGG CCTGCGCTCC AGGCACTCTG GTGGTCGTTT CATCTGGTGC CCCCCTTTGG CAGTCACGAA ATCTTTGTCG GCTTGAGCAA TTATTGGCGG GTACTGAAAG ACCCCGGCGT GCTCGCATCG CTGGGCTCGA CGCTGGTGTT CAGCCTGTCG AGCGTGATGC TTTCGATCCT TATCGCGTTG GTGCTTGCGC TGTGCCTTGA GCTGAGGTTG CGTGGCAACG CGGTGTTTCG CAACCTGCTG ATCTGGCCCT ACGCAGTATC GGGCGCGACC ATCGGCATTG TCTTTCACGT GCTGGCCAAT CCGGTGATGG GCATTTTTGC CTGGCTCAAC GCGATCGCCC CCGGTACCTG GGCGCCCTAC GCCATCCCCG TGCAAAGTAT GCTGCTGTTG ATCGCGGCGT ATGCCTGGTG CCTGGTGCCG TTCAACTTTG TGATGCTGGT CGCCAGCCTG AAGTCGGTGC CGGACGATTA CCTCGCCGCT GCGGCAATGG ATGGAGCAGG CCCCTTGCGC CGCATGCTCG ATATTCAATT GCCACTGATC GCGCCGTATC TGCTGTTCGT GTTCGTCATC GACCTGCTGG AAAGCCTGTC CAACAGTTTC GGACTGGTCG ACACCCTCAC TCACGGCGGG CCGGGCGATA CCACCAACGT GTTGGCCTAC AAGATTTACA CCGACGGTTT CATGGGGCTG GACCTGGCCG GATCATCGAC ACTTTCCGTG CTCATGCTGT TGGCAGTCGT GGCGTTGAGC GTTGCACAGT TCAAGCTCAT GTCGCGCTTC AAACGCCGTG GGGTGAAAAC ATGA
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Protein sequence | MKAGAHFPQP RLALLFALPQ LLALGLFFYW PALQALWWSF HLVPPFGSHE IFVGLSNYWR VLKDPGVLAS LGSTLVFSLS SVMLSILIAL VLALCLELRL RGNAVFRNLL IWPYAVSGAT IGIVFHVLAN PVMGIFAWLN AIAPGTWAPY AIPVQSMLLL IAAYAWCLVP FNFVMLVASL KSVPDDYLAA AAMDGAGPLR RMLDIQLPLI APYLLFVFVI DLLESLSNSF GLVDTLTHGG PGDTTNVLAY KIYTDGFMGL DLAGSSTLSV LMLLAVVALS VAQFKLMSRF KRRGVKT
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